LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g0524	ATGGCATCGTGTTTCACCTATGCAATACCCTTTATCTTTTTTATCTCTCTCTGTTTTACTCCCACTAGAGCTCAGGGACTTCAATATCAGTACCAAGTTTGCTCACCAAACAAATTCACTCCCAACACCACCTTCCAAAGCCACCTCACAACTCTATTCTCTTCCTTATCTTCAAAAGCCTCCAACAATGTCCAATTCTTCAACAACACCGTCACGGGGACAAACCCCTCCGACACAGTCTACGGACTATTCATGTGCAGAGGGGACATCCCCTCCGACCTATGTAACCATTGCGTCGGAAACGCGACACAGAGACTGTCCACACACGTAGATTGTTCGTTTTCCATAGAAGCAGTGGTGTATTACGACGAGTGCATAGTTCGGTATTCCAACCTCTCTTTCTTCGGCACCGCCGACATGGAAATCAACTCAGGCTATGTTCTGGCGAGCCCCATCAACATGACAAACCAAGAAAGCTTCAAGCGTTTGGTGTATGTGAGTTTGAACGAAACTGCGGATGAGGCAGTGGGTTCAGGTAGCGGCGGTGAGAAGTTCGCGACAAAGGAAACAGACATAGATATATTTCAGAAGCTATATTGTCTTGTACAGTGCACACCGGACCTGTCTCCCCGAGATTGCAGAAGCTGCCTGAATAGTTTGATAAACTCCGATCTTCCGCGGTGCTGTGCAGGGAGGCAGGGAGGAAGAGTTTTATATCCCAACTGCGTCATCAGGTTTGAAATTTACCCTTTTTTTCGATCTCATGGTTCGGCTCCAACGCCAACACCGCCGAAATTGGGAGAAAAAAAATCGAGTACATCAAGAACAATTATCTTAGTTGTTGTACCCATTGTTAGTTTGGCAACTCTCTCTGCTTTCTGCTACTACTTACTAAGGAGAAGAGCAAGAAAGAGGCTAAAGAACCTTCTTAGAGAAAATTTTGGTGAAGAAAGTTCAATTCTAGAAGGGTTGCAATTTGATCTGGCTACTATTAAATTAGCAACCGATAATTTTTCAAATGAAAGGGAGATTGGAAAAGGTGGATTCGGAGAGGTTTATAAGGGTGTTCTTGTTGATGGGCGACATATAGCGGTTAAAAGACTTTCAATAGGTTCCAAACAAGGTTCAGTTGAATTTAAGAACGAGATTTTGTTGATAGCTAAGTTACAACATAGAAATCTGGTGGCATTCATGGGATTTTGTTTAGAAGAGGAAGAAAAGATTCTTATTTATGAATATGTGCCAAATCGTAGTCTGGATTACTTCTTATTTGGTAATCAACAACAAAAGTTAAGTTGGCACGAACGTTATAAAATTATAGGAGGAACTGCTTCAGGAATTCTTTATTTGCATGAATATTCTCAACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATATTTTGTTGGATGAAAATATGAATCCTAAAATATCAGATTTTGGTCTGGCTAGAATTTTTGATGTGGATCAAAATCGTGCTGAAACTGATCGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTCTCTGAAAAATCAGATGTATTTAGTTTTGGGATTATAGTTCTTGAGATTATTACAAGTAAAAAGAATGCGCGTTCTTATGAATCACACAATATGGAAGAAGGCCTCATGACTTATGTGTGGAGACATTGGAAGAATGAAACACCAATGAGTATATTGGATCCAAATATGAAAGAAAATTATTATGAAACTGAAGTTATTAGATGCATTCAAATTGGATTATTATGTGTACAAGAAAATCCAAACATTAGACCTACCATGGCAACAGTAGTTTCATATCTTAATAATCATTCACTTGAATTGCCATCACCTCAAGAACCTGCCTTTTTCTTACACGGAATAGATAAAAAAGTTATGCAGCAAGGATCAAGTTCCACCATTTCTGCCAACAGTTCCATGCCATTCTCTGTCAATGAAATGCCTACAACTAGTTTTTATCCACGATAA	1992	0.3931	MASCFTYAIPFIFFISLCFTPTRAQGLQYQYQVCSPNKFTPNTTFQSHLTTLFSSLSSKASNNVQFFNNTVTGTNPSDTVYGLFMCRGDIPSDLCNHCVGNATQRLSTHVDCSFSIEAVVYYDECIVRYSNLSFFGTADMEINSGYVLASPINMTNQESFKRLVYVSLNETADEAVGSGSGGEKFATKETDIDIFQKLYCLVQCTPDLSPRDCRSCLNSLINSDLPRCCAGRQGGRVLYPNCVIRFEIYPFFRSHGSAPTPTPPKLGEKKSSTSRTIILVVVPIVSLATLSAFCYYLLRRRARKRLKNLLRENFGEESSILEGLQFDLATIKLATDNFSNEREIGKGGFGEVYKGVLVDGRHIAVKRLSIGSKQGSVEFKNEILLIAKLQHRNLVAFMGFCLEEEEKILIYEYVPNRSLDYFLFGNQQQKLSWHERYKIIGGTASGILYLHEYSQLKVIHRDLKPSNILLDENMNPKISDFGLARIFDVDQNRAETDRIVGTYGYMSPEYAMLGQFSEKSDVFSFGIIVLEIITSKKNARSYESHNMEEGLMTYVWRHWKNETPMSILDPNMKENYYETEVIRCIQIGLLCVQENPNIRPTMATVVSYLNNHSLELPSPQEPAFFLHGIDKKVMQQGSSSTISANSSMPFSVNEMPTTSFYPR*	664

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g0524	663	Pfam	Protein tyrosine and serine/threonine kinase	340	609	IPR001245	GO:0004672\|GO:0006468
	Pvu7g0524	663	CDD	STKc_IRAK	344	611	-	-
	Pvu7g0524	663	Gene3D	Transferase(Phosphotransferase) domain 1	414	618	-	-
	Pvu7g0524	663	SMART	serkin_6	338	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0524	663	ProSiteProfiles	Protein kinase domain profile.	338	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0524	663	ProSiteProfiles	Gnk2-homologous domain profile.	27	134	IPR002902	-
	Pvu7g0524	663	Gene3D	-	26	134	IPR038408	-
	Pvu7g0524	663	Gene3D	-	145	251	IPR038408	-
	Pvu7g0524	663	Gene3D	Phosphorylase Kinase; domain 1	301	413	-	-
	Pvu7g0524	663	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	267	650	-	-
	Pvu7g0524	663	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	18	255	-	-
	Pvu7g0524	663	Pfam	Salt stress response/antifungal	154	248	IPR002902	-
	Pvu7g0524	663	Pfam	Salt stress response/antifungal	34	131	IPR002902	-
	Pvu7g0524	663	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	458	470	IPR008271	GO:0004672\|GO:0006468
	Pvu7g0524	663	SUPERFAMILY	Protein kinase-like (PK-like)	322	641	IPR011009	-
	Pvu7g0524	663	ProSitePatterns	Protein kinases ATP-binding region signature.	344	366	IPR017441	GO:0005524
	Pvu7g0524	663	ProSiteProfiles	Gnk2-homologous domain profile.	142	251	IPR002902	-
	Pvu7g0524	663	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	18	255	-	-
	Pvu7g0524	663	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	267	650	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g0524	Pvu-Chr7	4086932	4090936	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g0524	1	663	Receptor kinase-like Gene Family	AT4G05200	44.783	0.0	566

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pvu7g0524		PK_Tyr_Ser-Thr	1.3e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g0524	-		-	vun:114191422	974.156