Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0523 ATGTCGTTACTCGTTTACGTTTTCTTTTTGGGGTTCTTCTTCAATTTTTCCATAACCGAAGCCACTGAAATTTACTACCTCAATCACAGTTGCTCAAGCAACAAAACCTTCACTCCAAACACCGCCTACGAAACCAACCTTCGAACGCTCCTCACGTCCCTATCTTCCCATGCCACCACTGCGCAATTCTTCAACACCACAACGGGTGGTGGAGACGGCAGCGAAATCATTTACGCCTCCTTCATGTGCCGCGGCGATGTCAGCAACCGCACGTGCCAAGAGTGCGTTAGAACTGCAGCCGAACAAATATCCAGAGTGTGTCCCATCTCCAAAGAGGCCTTGATTTGGTACCACGAATGTTTGGTTCGTTATTCCAATCGGTGTTTTTTCTCCACCTTGGAGGAGTGGCCAAGGTTCAACTTCATGGGTTCCCACGTAACGAATTCAAGAAATGAGAAAGGAAGCTATGGGTTCTGGTTGTTATCCAAAACGCTGAGTGATGCTGTGGGTGAGGCAGCGAACGCTGGTCCCGCAGGCACCATGAAGTTTGCAACAAAAAACGCTACCGTGTTTGGGTCTCAGAAGATTCATACTCTTGTTCAGTGCACGCCAGATCTATCAAGCGAAGATTGCAGTAACTGTTTGGGTGATATTATGAGAGATATTCCTTTGTGCTGCCTTGGAAGGATAGGTGGAATGGTTCTATATCCCAGCTGCACTTTGATGTTTGGTACAAGACATTTCTACAGAGACGTTAATGCCATCCAAGAATCAAAACCTTCTGGAATTAAAATGGGTTCACCAGGATCAATTTTCACAGTTGTCATTCTTCTCGTTTTGACAATGCTGATCTCTTTTCACTGTTATTTCTTATGGAGAAGAGCAAGAAAGCGCAAGTATAAGATTCTTTTAAAAGAAAACTTTGGTCAAGAAAGTGTGACTTTGGAAGGGTTACAATTTGATTTAGCTATAATTGAAGCAGCAACAAATAACTTTTCAAATGAAAACAAGATTGGAAAAGGTGGTTTTGGAGAAGTTTACAAGGGTATCCTTTCATGTGGACTACATATCGGAGTAAAAAGATTATCACAAAGTTCTACACAAGGTTCCATTGAATTTAAGAATGAAGTTTTATTAATAGCCAAATTACAACACAGGAACCTCGTGGAATTAATAGGGTTTTGTCTAGCCGCACAAGAGAAGATACTTATATACAAATTCATGCACAACGGGAGTCTTGATAAATTTTTATTTGGTAATCAACAAAAGACATTGAGTTGGTCTCAACGTTTCAAAATTATAGAAGGAATTGCTCAAGGAATTCTTTATTTGCATGAACATTCTCGACTTAAAGTTATACATCGTGATATCAAACCTAGCAATATTTTATTGGATAAAAATATGAATCCTAGGATATCAGATTTTGGTATGGCCAAAATTATGGAAATAGACCAAGATCATGGAAAGACCAAACGAATAGTTGGAACATATGGTTATATGTCTCCCGAATATGCAATGTTTGGACAATTTTCTGAGAAATCAGATATTTTTAGTTTTGGAGTTATGATTTTGGAGATTGTTACAGGAAAAAAGAACATAAATTTTCATGAATCACAATACATGCCAAATGGACTCTTGAGCTATGTTTGGAGAAAATGGAAAGAGAAAACACAATTGAGCATAATAGACCCACTTTTGGAAGAAAATTATTCTAAAAATGAAGTAATTAAGTGTATTCATATTAGTTTATTATATGTTCAAGAAAAGAAAAGTATTAGACCTACAATAGCAGATGTTGTTTCATATCTTGATGGTCGTCACACACTTGAATTTCCATCCCCACAAGAACCGGCATTTTTCTTAGAGGACAAGATGGATACAAAAACATCTACAGAACACTTTTCTGTTAACGAGATGTCCATTAGTACATATTATCCTCGATAA 1944 0.3817 MSLLVYVFFLGFFFNFSITEATEIYYLNHSCSSNKTFTPNTAYETNLRTLLTSLSSHATTAQFFNTTTGGGDGSEIIYASFMCRGDVSNRTCQECVRTAAEQISRVCPISKEALIWYHECLVRYSNRCFFSTLEEWPRFNFMGSHVTNSRNEKGSYGFWLLSKTLSDAVGEAANAGPAGTMKFATKNATVFGSQKIHTLVQCTPDLSSEDCSNCLGDIMRDIPLCCLGRIGGMVLYPSCTLMFGTRHFYRDVNAIQESKPSGIKMGSPGSIFTVVILLVLTMLISFHCYFLWRRARKRKYKILLKENFGQESVTLEGLQFDLAIIEAATNNFSNENKIGKGGFGEVYKGILSCGLHIGVKRLSQSSTQGSIEFKNEVLLIAKLQHRNLVELIGFCLAAQEKILIYKFMHNGSLDKFLFGNQQKTLSWSQRFKIIEGIAQGILYLHEHSRLKVIHRDIKPSNILLDKNMNPRISDFGMAKIMEIDQDHGKTKRIVGTYGYMSPEYAMFGQFSEKSDIFSFGVMILEIVTGKKNINFHESQYMPNGLLSYVWRKWKEKTQLSIIDPLLEENYSKNEVIKCIHISLLYVQEKKSIRPTIADVVSYLDGRHTLEFPSPQEPAFFLEDKMDTKTSTEHFSVNEMSISTYYPR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0523 647 Pfam Protein tyrosine and serine/threonine kinase 334 534 IPR001245 GO:0004672|GO:0006468
Pvu7g0523 647 CDD STKc_IRAK 338 605 - -
Pvu7g0523 647 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 257 - -
Pvu7g0523 647 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 267 633 - -
Pvu7g0523 647 Gene3D - 145 248 IPR038408 -
Pvu7g0523 647 Gene3D - 23 129 IPR038408 -
Pvu7g0523 647 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 257 - -
Pvu7g0523 647 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 267 633 - -
Pvu7g0523 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Pvu7g0523 647 Gene3D Transferase(Phosphotransferase) domain 1 408 611 - -
Pvu7g0523 647 ProSiteProfiles Gnk2-homologous domain profile. 140 248 IPR002902 -
Pvu7g0523 647 Gene3D Phosphorylase Kinase; domain 1 294 407 - -
Pvu7g0523 647 ProSiteProfiles Protein kinase domain profile. 332 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0523 647 SMART serkin_6 332 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0523 647 Pfam Salt stress response/antifungal 161 244 IPR002902 -
Pvu7g0523 647 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Pvu7g0523 647 ProSiteProfiles Gnk2-homologous domain profile. 25 129 IPR002902 -
Pvu7g0523 647 SUPERFAMILY Protein kinase-like (PK-like) 316 637 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0523 Pvu-Chr7 4081341 4085371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0523 8 647 Receptor kinase-like Gene Family AT4G05200 42.815 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0523 PK_Tyr_Ser-Thr 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0523 - - gmx:100792162 968.378