Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0522 ATGATTACCAAGTCCAAAAATAATCTAAAACTCTTCCTCTTTTGCACCCTTGTGCTCACCGTTACAGAAACATCTGCTTCCGTCTTCAACAACGTTAGCTGCACCAGCAACCACACTTTCACTCCAAACTCCACCTTCAACGCCAACCTCAACACCCTTCTCTCTTACCTTTCCTCCAACGTCACCAACGACACTAGATTCTTCAACACAACGTCAGGGGAGGATTCGGACACCGTCTATGGCCTCTACATGTGCCGTGGAGACGTCCCGTTTGCTCTATGCAGAGAGTGTGTGGGTTTTGCGACACAAACCATAGCCTCGTCGTGTCCCACATCGAAAGAGGCTGTGATTTGGTACAACGAGTGTTTGTTGCGCTACTCTTATAGGTTCTTCTTCTCCAAAATGGAAGAGTGGCCGAGGCACCAGGTCAATATCCCGTTGGGGGATCCTGTTGTTTTGCACAGTAGTGGATTCTACGATGCTTTAGGGTCCATTTTTGATGAACTTCCAAATCAAGCAGCACTGGCTCTTAAAGGGTCTAATAATCCTTATGCCGTTAAGCAAGAAAACGCTTCTGCGAGTATTACCGTCTATGGCCTCGCTCAGTGCACACCAGACTTGGTGGCCGGAGATTGCAGACGGTGTATCGCGGATGCGGCGGCGGAATTCGCAGTGTCTTGTTGCGGAGGGAGCATAGGGGCAAGTATTCTGTTTCCCAGTTGCATTGTTAGGTATGAAACGTATCCGTTTTATCAGCATTCAGGAACCTCCGCGCCAACAATGATTAAGGGTTCTGGAAATATTGGCACTGAAGTGATTGTGATAGTGGTTGTCTTGGTTGCCCTTTTGGTAATCTTTTTTTGCTTTGGCTACTACGGTTTCATCTGGATAAAAGGGAGAAAGAAACGCAAGGCCAGCGACCACAGAGAAAACTTTGGGGAAGAAATCAGTGTGTTGGAGTCCCTGGAATTTGATTTTGCTACAATTGAAGCAGCAACAAACAAGTTTTCTGAAGAGCGCAGGATTGGCAAAGGGGGTTACGGAGAAGTCTACAAGGGAATCCTTCCTAACGGAGAAGAAGTGGCTGTAAAGAGATTGTCAACAAATTCTAAGCAGGGAGAGGAGGAATTCAAGAATGAAGTGTTGTTAATTGCTAAACTTCAACACAAAAATTTGGTAAGGTTAATAGGATTTTGCCAAGAAGACAGAGAGAAAATACTTGTCTACGAATACGTGCCTAACAAAAGCCTTGATCACTTTTTATTTGATTCCCAAAAACGCAGAGTATTGACTTGGTCAGAGCGGTTTAAAATCATAAAAGGAATTGCAAGAGGAATTCTTTATCTTCATGAAGACTCTCGTCTTAAGATTATACACCGTGACATCAAACCAAGCAATGTTCTATTGGACAATGACATCAATCCAAAAATTTCCGATTTTGGCATGGCAAGGATGGTAGATACAAATCATATTCAAGGATGTACGAAAAGAGTTGTGGGTACATACGGGTACATGTCTCCTGAATATGCCATGCATGGAAAATTTTCTGACAAGTCTGATGTGTTCAGTTTTGGAGTTATGACTCTTGAGATTATTAGTGGAAAGAAGAATTCTTGTTCTTTTGAATCACATCGTGTTGATGATCTTTTGAGTTATGCATGGAACAACTGGAGGGATGAATCGCCATTTGTGTTGTTGGATCCAGCTCTTGAAGAATCTTATTGTCCAAACGAAGTTGAAAAGTGTATACAGATTGGTTTATTGTGTGTGCAAGAAAATCCTGATGAGAGACCTATAATAGGAACCATCGTTTCATATCTTAACAACACTTCAGTTCAAGTTCCAATCCCTTTAGAGCCAGCGTTTTTCATGCATGGCAGAGTAAGAAGACATTCAACTGAACATCAACCATCATCAGAATTTACCCTAAAAAGACATTGGAACGAATTGATGGACATTGGAAAGAATTGA 1971 0.4252 MITKSKNNLKLFLFCTLVLTVTETSASVFNNVSCTSNHTFTPNSTFNANLNTLLSYLSSNVTNDTRFFNTTSGEDSDTVYGLYMCRGDVPFALCRECVGFATQTIASSCPTSKEAVIWYNECLLRYSYRFFFSKMEEWPRHQVNIPLGDPVVLHSSGFYDALGSIFDELPNQAALALKGSNNPYAVKQENASASITVYGLAQCTPDLVAGDCRRCIADAAAEFAVSCCGGSIGASILFPSCIVRYETYPFYQHSGTSAPTMIKGSGNIGTEVIVIVVVLVALLVIFFCFGYYGFIWIKGRKKRKASDHRENFGEEISVLESLEFDFATIEAATNKFSEERRIGKGGYGEVYKGILPNGEEVAVKRLSTNSKQGEEEFKNEVLLIAKLQHKNLVRLIGFCQEDREKILVYEYVPNKSLDHFLFDSQKRRVLTWSERFKIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNDINPKISDFGMARMVDTNHIQGCTKRVVGTYGYMSPEYAMHGKFSDKSDVFSFGVMTLEIISGKKNSCSFESHRVDDLLSYAWNNWRDESPFVLLDPALEESYCPNEVEKCIQIGLLCVQENPDERPIIGTIVSYLNNTSVQVPIPLEPAFFMHGRVRRHSTEHQPSSEFTLKRHWNELMDIGKN* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0522 656 CDD STKc_IRAK 342 609 - -
Pvu7g0522 656 ProSiteProfiles Gnk2-homologous domain profile. 139 250 IPR002902 -
Pvu7g0522 656 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Pvu7g0522 656 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 633 - -
Pvu7g0522 656 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Pvu7g0522 656 Pfam Protein kinase domain 337 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0522 656 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0522 656 Gene3D - 151 250 IPR038408 -
Pvu7g0522 656 Gene3D - 27 131 IPR038408 -
Pvu7g0522 656 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 8 633 - -
Pvu7g0522 656 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Pvu7g0522 656 SUPERFAMILY Protein kinase-like (PK-like) 322 631 IPR011009 -
Pvu7g0522 656 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Pvu7g0522 656 Pfam Salt stress response/antifungal 156 248 IPR002902 -
Pvu7g0522 656 ProSiteProfiles Protein kinase domain profile. 336 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0522 656 Gene3D Phosphorylase Kinase; domain 1 297 411 - -
Pvu7g0522 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0522 Pvu-Chr7 4072133 4075906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0522 6 625 Receptor kinase-like Gene Family AT4G05200 45.426 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0522 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0522 - - var:108324780 1134.4