LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g0519	ATGTGCATCTTGAAATCGTGTTCAACCCAGTTGCTAATTCTCTCCCTGTTTGTGTTTCTAAACTTTGCAAGTGAAGCTGCAACATATAGCTCGCATGTCTGCACAGATGGATCCTTTTACCGACCCAACACAACATTCCAAAACAACTTGAACCTCCTCCTCTCATCTCTTGTCTCCAACGCCACCCTTCACGACGGTTTCTACCGCACCAAAATCTCACTCGGAGCCCCTGGAGAGATCAAGGGACTCTTCCTCTGCCGCGGCGATGTCACACCCTCCGTCTGTCACGACTGCGTCACCGCCGCAGCAAAAAACATCACTCAACGCTGCACCAACCAGACAGAGTCCATTATCTGGTACGACGAGTGCATGCTGCGCTACTCCAACAGTTCCGTCCTCAACAACATAGTCCCAGGGGTTAACTTATTAAACGTAGAAAGCGTCCCTGACTCGGACTACTTACAGTTCAACAATATTCTTGCCTCCACGTTGAATGATGCGAAACAAGAAGCTATCAGTTCGGGGAAAATGTTTTCTACAAAAGAAGCGAATGTCACGAGCTCAATGAAGATCTACACACTGGCGCAGTGCACTCCCGATTTGTCCACTTCTGAATGTAACACGTGCTTCTCAAGCGCCATCAGTTCCTTTCCAAACTGCTGTGACCGCAAACAAGGTGCACGGTCCCTGCTTCCGGGTTGTAATGTCAGATATGAATTGTACCCGTTTTACAATGTTTCCTCTGTCTCCACACAACCAGAGTTCTTCTCTCCATCTTCAGGGAAAGGCAGAATTTCGTTAATTGTGGCGATTGTTGTCCCAATTGTTGTTGCGGTTGTACTTCTCATTGTTGGCGTCTGCTTCCTACGTAAGAGGGCAAGTAATACATACCTTAGTTCTTTTCGCCAGGATTCAATTGTGGATGATCTTACTGATGTGGAGTCCTTGCAATTTGACATGGCTACAGTTGAAGCTGCCACAAACAGATTCTCGGATGAAAACAAGATTGGCCGTGGCGGATTTGGGGTGGTTTATAAGGGTGTCCTCTCTAATGGACAAGAGATAGCAGTGAAGAGGTTGTCAGTAACTTCCTTGCAGGGTGCAGTAGAGTTCAGGAATGAAGCTGCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGATTATTGGGATTTTGCTTGGAGGGCCAGGAAAAGATTCTTATCTATGAATATATACCAAACAAAAGCCTTGATCACTTTCTATTTGACCCTGTCAAGCAAAGAGAGTTAGATTGGTCAAGACGCTACATTATAGTTGGTATTACTCGAGGAATTCTTTATTTACATGAAGATTCTCAACTTAGAATTATACATCGGGATATAAAAGCTAGTAACGTTTTACTAGATCAAAATATGAATCCAAAGATTTCAGATTTTGGTATGGCAAAAATTTTCGAGGCAGATCAAACTCAAGTACAGACAGGAAGAATTGTTGGGACATATGGTTATATGTCTCCCGAATACGCAATGCGTGGACAATTTTCAGAGAAATCAGATGTGTTCAGCTTCGGTATCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAATGCTGGTTTGTATCAATCGAAACACGCTGATGACCTCTTAACTCTTGCTTGGAAGCATTGGACAGAGGAAACACCTATGGAGTTTCTGGATCCAACTCTGAGAGGTTCTTATTCAAGAAATGAAGTAAATAGATGCATCCATATTGGTCTATTATGTGTTCAGGAGAGTCCATCTGACAGACCATCAATGGCCACCATTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCAATGCCACGACAACCAGCATCTTTCCTGCGTGGAAGAAGTCCTAACAGGCTAAACCCAGGGCTTGACTCTGATCAGTCTACCACCAACCAGTCTACCACTAGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACGGAATTATACCCTCGGTAA	1980	0.4394	MCILKSCSTQLLILSLFVFLNFASEAATYSSHVCTDGSFYRPNTTFQNNLNLLLSSLVSNATLHDGFYRTKISLGAPGEIKGLFLCRGDVTPSVCHDCVTAAAKNITQRCTNQTESIIWYDECMLRYSNSSVLNNIVPGVNLLNVESVPDSDYLQFNNILASTLNDAKQEAISSGKMFSTKEANVTSSMKIYTLAQCTPDLSTSECNTCFSSAISSFPNCCDRKQGARSLLPGCNVRYELYPFYNVSSVSTQPEFFSPSSGKGRISLIVAIVVPIVVAVVLLIVGVCFLRKRASNTYLSSFRQDSIVDDLTDVESLQFDMATVEAATNRFSDENKIGRGGFGVVYKGVLSNGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDHFLFDPVKQRELDWSRRYIIVGITRGILYLHEDSQLRIIHRDIKASNVLLDQNMNPKISDFGMAKIFEADQTQVQTGRIVGTYGYMSPEYAMRGQFSEKSDVFSFGILVLEIVSGKKNAGLYQSKHADDLLTLAWKHWTEETPMEFLDPTLRGSYSRNEVNRCIHIGLLCVQESPSDRPSMATIALMLNSYSVTMSMPRQPASFLRGRSPNRLNPGLDSDQSTTNQSTTSSIPWSVNEVSITELYPR*	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g0519	659	MobiDBLite	consensus disorder prediction	626	644	-	-
	Pvu7g0519	659	Gene3D	Phosphorylase Kinase; domain 1	293	405	-	-
	Pvu7g0519	659	MobiDBLite	consensus disorder prediction	614	644	-	-
	Pvu7g0519	659	Gene3D	-	140	243	IPR038408	-
	Pvu7g0519	659	Gene3D	-	26	131	IPR038408	-
	Pvu7g0519	659	Pfam	Salt stress response/antifungal	34	129	IPR002902	-
	Pvu7g0519	659	Pfam	Salt stress response/antifungal	155	241	IPR002902	-
	Pvu7g0519	659	ProSiteProfiles	Gnk2-homologous domain profile.	28	132	IPR002902	-
	Pvu7g0519	659	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	6	658	-	-
	Pvu7g0519	659	SMART	serkin_6	330	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0519	659	CDD	STKc_IRAK	336	601	-	-
	Pvu7g0519	659	ProSitePatterns	Protein kinases ATP-binding region signature.	336	358	IPR017441	GO:0005524
	Pvu7g0519	659	SUPERFAMILY	Protein kinase-like (PK-like)	316	626	IPR011009	-
	Pvu7g0519	659	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	6	658	-	-
	Pvu7g0519	659	Gene3D	Transferase(Phosphotransferase) domain 1	406	612	-	-
	Pvu7g0519	659	ProSiteProfiles	Protein kinase domain profile.	330	604	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0519	659	Pfam	Protein tyrosine and serine/threonine kinase	333	597	IPR001245	GO:0004672\|GO:0006468
	Pvu7g0519	659	ProSiteProfiles	Gnk2-homologous domain profile.	136	243	IPR002902	-
	Pvu7g0519	659	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	450	462	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g0519	Pvu-Chr7	4060270	4063938	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g0519	4	659	Receptor kinase-like Gene Family	AT4G05200	48.905	0.0	651

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pvu7g0519		PK_Tyr_Ser-Thr	3.3e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g0519	-		-	gmx:100788416	1025.39