Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0517 ATGCTAGTCTCCAACTTCTGTGCAACCTCGTTAACGCTTCAATCACTATGTCTGTTATGTATGCTCTTTCATGCAACTGCATCACCACCCGTTTACAGTGCCCACTTCTGCTCCGACCAAAACTCCGACCAAAACTCTTACGCATCCGACACCAAATTTATGTCTAACTTGAATACCCTTCTCTCTTCTCTTGTTTCAAACTCCTCCCTCCCCTCCAACAACGGTTTCCTCCGAACCTCCGTCGCTAAAGGCACCCCCGACGACATCGACGGCCGTTTCCTCTGCCGTGGCGACGTCAACGAAACCGTCTGCCACAGCTGCATCGCCGCCGCAGCAGCGAACATAACGCGCCTCTGTCCCAATAATACCGAGTCCTATATCTGGTACGATGAGTGTACGCTAATCTACTCCAACAGCACCTTCCAATATGATAACATGGTTCCCAAGTTTACCCTCAACGACGAAGGAAGCATCGTTAACTCAAATCACGACCAGTTCAACCAATTACTGTTGAGCTTGTTAAAAGGTTTGGAGGAAAAAGCTTCGGCGAGTTCCATGGGAGAGAAGAAGTTCGCTGCAGGTACGGTGAGTGTGACGAGCGCGCAAACGCTGTACGGAATGGCGCAGTGCGAGCCTGACGCCACTAGTGGTAGTTGTGCGGCGTGCTTTGAAAACGCAATTTCAAGTATTCCGTCGTGTTGCAACGGAAGCGGAGGAGCAAGGCTTCTGCTTCCCATATGTAGCATCAGATACCAACTGTATCCCTTTTTATACAATTCCACTGCGATGATTCTCATTCCTTCTTCAGGTAGCAAAAGTATATTGATGGTTGTGGCAATTGTTATCCCTATTGCTATTTTGGCGGCGCTTTTGTTTATAGGATGCTGTTGGTGGCGAAGAAGGCAAAGAAAAAACCGTGAGGATGTCCAGGAAGTGAATGATAGCATTAGGAGATATTTAGCAAGTGAGGAAGAGTCTTTGCGTTTTGACTTGGCTACAATCGAAGCAGCCACAAATAGTTTTTCAAATGAGATGAAGATAGGAGAAGGTGGATTTGGTGCGGTTTATAAGGGTACCTTTCCTAATGGAGAAGAGATAGCTGTGAAGAGGCTATCAAGAACCTCTCTCCAAGGTGACAGAGAATTCAAGAACGAGGTTCTACTTGTTGCTCAGCTTCAACACAGAAATTTAGTTAGACTGTTAGGATTTTGCATGGAGGGAACGGAGAAGATACTGATTTACGAGTTTATCCAAAATTCCAGCCTTGACCGCTTTCTATTTGGGCACGAAGACCAAGGAGGGCTAGACTGGGCAAGACGTTACAAAATTATAGTAGGGATTGCAAGTGGAATTCAATATCTCCATGAAGATTCTCGGCTAAAAGTAATACACCGTGATCTCAAGGCATCTAATGTTCTATTAGATTCCGATATGAATCCAAAGATTTCCGACTTTGGGATGGCAAAGATTTTTCATGGAGATCAAAGTCGAGAAAATACAAGAACAGGAAGGGTAGTTGGAACTTTTGGTTACATGTCTCCTGAATATGCCATGCATGGGAAATTCTCAGTGAAATCCGACGTGTTCAGTTTTGGAGTCTTGGTTTTGGAGATCATCAGTGGCAAGAAGAACAGTAGTTATTATCGATCACATGACGACAATGAGCTCTTGAGCTTTGCTTGGAAGAATTGGATAGATCAAACACCTTTCCAGATATTGGACCCAAAACTGAGAGGTTCTTATTCTAGAAATGAAGTTCAGAGATGCATCCATATTGCTTTATTATGTGTTGAAGAAAACCCAGTTGAGAGACCTTCAATGGCGACAATAATGCTTGCGTTGAACGCTTATTCAGTAACTTTAGGGTTGCCTCGAAAGCCAGCATTTTTTGTGAGAGGAAGAGCAACAACAGACAGATTAAGACAGCAGCTTGATTCTGATCACTCCAACACTTCTTCAGTCCCTTTTTCTGCTGGTGATTCATTAATCACTGAAGTATATCCCCGTTAA 2010 0.4428 MLVSNFCATSLTLQSLCLLCMLFHATASPPVYSAHFCSDQNSDQNSYASDTKFMSNLNTLLSSLVSNSSLPSNNGFLRTSVAKGTPDDIDGRFLCRGDVNETVCHSCIAAAAANITRLCPNNTESYIWYDECTLIYSNSTFQYDNMVPKFTLNDEGSIVNSNHDQFNQLLLSLLKGLEEKASASSMGEKKFAAGTVSVTSAQTLYGMAQCEPDATSGSCAACFENAISSIPSCCNGSGGARLLLPICSIRYQLYPFLYNSTAMILIPSSGSKSILMVVAIVIPIAILAALLFIGCCWWRRRQRKNREDVQEVNDSIRRYLASEEESLRFDLATIEAATNSFSNEMKIGEGGFGAVYKGTFPNGEEIAVKRLSRTSLQGDREFKNEVLLVAQLQHRNLVRLLGFCMEGTEKILIYEFIQNSSLDRFLFGHEDQGGLDWARRYKIIVGIASGIQYLHEDSRLKVIHRDLKASNVLLDSDMNPKISDFGMAKIFHGDQSRENTRTGRVVGTFGYMSPEYAMHGKFSVKSDVFSFGVLVLEIISGKKNSSYYRSHDDNELLSFAWKNWIDQTPFQILDPKLRGSYSRNEVQRCIHIALLCVEENPVERPSMATIMLALNAYSVTLGLPRKPAFFVRGRATTDRLRQQLDSDHSNTSSVPFSAGDSLITEVYPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0517 669 Pfam Salt stress response/antifungal 161 253 IPR002902 -
Pvu7g0517 669 Pfam Salt stress response/antifungal 37 138 IPR002902 -
Pvu7g0517 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Pvu7g0517 669 ProSiteProfiles Gnk2-homologous domain profile. 146 256 IPR002902 -
Pvu7g0517 669 ProSiteProfiles Gnk2-homologous domain profile. 35 141 IPR002902 -
Pvu7g0517 669 CDD STKc_IRAK 347 610 - -
Pvu7g0517 669 SMART serkin_6 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0517 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 668 - -
Pvu7g0517 669 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0517 669 Gene3D Phosphorylase Kinase; domain 1 301 416 - -
Pvu7g0517 669 Pfam Protein tyrosine and serine/threonine kinase 344 612 IPR001245 GO:0004672|GO:0006468
Pvu7g0517 669 Gene3D Transferase(Phosphotransferase) domain 1 417 621 - -
Pvu7g0517 669 Gene3D - 32 141 IPR038408 -
Pvu7g0517 669 Gene3D - 152 256 IPR038408 -
Pvu7g0517 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 668 - -
Pvu7g0517 669 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pvu7g0517 669 SUPERFAMILY Protein kinase-like (PK-like) 326 640 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0517 Pvu-Chr7 4048095 4052163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0517 18 669 Receptor kinase-like Gene Family AT4G05200 46.266 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0517 PK_Tyr_Ser-Thr 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0517 - - ccaj:109806163 937.176