Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0514 ATGCTTTTCTCCAACCTCACAACTATGACCTTGTTTTTCAGGATGCCCATATTTCTTTTTATCTTTCTCCAACTCATATCCATATCTCAATGCAACGCCCAACCAGTATTTCATTTACACCAATGTATGAATCACAAGGGTAATTACACTGCTAACAGCACCTACCACAACAACCTCAACACCCTTTTGTCCAACCTCTCTTCAAACACAGATATTGACTATGGCTTCTACAATTTTTCATATGGCCAAGAAAGTGACAGAGTTAACGCAATTGGGCTGTGCAGAGGAGATGCTAAGCCAGATGCTTGCCGCATGTGCTTGAGTGATTCCAAAGTCCTTCTCACGCAACTGTGTCCAAATCAGAAGGAGGCGATCTTGTGGTATGACTACTGCATGTTACGCTATTCCAACCGCTCAATATTCAAGACCATGGAAGCCACACCTGGATTCTCTAAGCGGACCTATAATGCAACCGATGGTGATAGTTTCAACGAAGTGCTGAGGAACTTGCTAGAGAACCTCACAAGCCAAGCTTCAACAGGCGACTCTCTGCGTAAGTTTGCTGTAGCAAATGCTTCAGGACCAGCCTTCCAAACTATATTTGGTCTTGTGCAGTGTACACCTGACCTTTCAGAAAAACACTGTGATGAATGCCTGCTTAAGACTATCTCAGAAATTCCACAATGTTGTAATGGCAGTAAAGGTGCTAAATTTTTTAAACCCAGTTGTATCATCAGATATGAGATATTCCCCTTCTATGATCCTATCAATGCTGCAACAACACATGCATCACCACCACCACTACCGCAGGCATCAACAAAAGGAAAGATAATTGTATCTGGATCTGTAATAGCAATAGCTGTGACAATTAGTGCCTTTGTCATTCTAGTCAACCTTATCTGCTGCATCAATTTAAGAATGAGGAGTTGTCGGAAACAATTTGAAGCTGAAAATGATGACGAAATTCAGTCAACGAAGACATTACCATTGGAATTCGCCAGTATCATGGTTGCTACCAACAACTTCTCTGATGCAAATAAGCTAGGAGAAGGAGGATTTGGGCCTGTTTACAAGGGTAGGCTCTCCTATGGTCAGGAAGTAGCAGTGAAAAGGTTGTCTAAGAATTCTCTCCAAGGAAACACAGAGTTTAAGAATGAAGTGTTGTTAGTGGCCAAGCTTCAGCATCGAAATTTAGTTAAGCTACTAGGATTTTGTTTGGAAAGAAGAGAAAGGCTTCTGGTTTATGAATTCGTCCCCAACAAAAGCCTTGATTTCTTTATATTTGATGAAGACAGGCGTGAACAATTGGATTGGGAAAAGCGATACAAAATTATAATAGGCATTGCTAGAGGTCTTCTCTACCTTCACCAGGATTCAAGTGTGAGGATTATTCACCGAGATCTCAAAGCAAGCAACATTCTTTTGGATGCAGAGATGCATCCTAAGATATCAGATTTTGGCATGGCAAGATTATTTGAAGTGGATCAAAGTCAGGCCAATACAAGTAGAGTTGTTGGAACCTATGGATATATGGCACCGGAGTATGTTATCCATGGACAATTCTCAGTAAAATCTGATGTTTTTAGTTTTGGAGTATTGGTTCTTGAGATTGTAAGTGGCCAGAAAAACAGTTGGGTACAAAGAGGAGAGAATGAAGGGGATCTTCTAACCTATACATGGCAAACCTGGAGGAAAAGGACAATGTCAAACATCGTTGATCCCACAATCAGTGGTTCGAGCAATGAAATAATGAGATGTATACACATTGCGTTGCTTTGTGTTCAGGAAAAAGGGGATGATAGGCCAACCATGGCTTCTGTGGCACTCATGCTTAACAGCCACTCCGTTACGCTACCATTGCCCTCAAAACCTGCTTTCTCCATTGATAGTACAAGTTTATCAGTCATTCAATCAAATGAACCAAATATTCAATCAGTAAACGAGGCTTCCATTACCGAGCCATTTGCTCGCTAG 1974 0.4124 MLFSNLTTMTLFFRMPIFLFIFLQLISISQCNAQPVFHLHQCMNHKGNYTANSTYHNNLNTLLSNLSSNTDIDYGFYNFSYGQESDRVNAIGLCRGDAKPDACRMCLSDSKVLLTQLCPNQKEAILWYDYCMLRYSNRSIFKTMEATPGFSKRTYNATDGDSFNEVLRNLLENLTSQASTGDSLRKFAVANASGPAFQTIFGLVQCTPDLSEKHCDECLLKTISEIPQCCNGSKGAKFFKPSCIIRYEIFPFYDPINAATTHASPPPLPQASTKGKIIVSGSVIAIAVTISAFVILVNLICCINLRMRSCRKQFEAENDDEIQSTKTLPLEFASIMVATNNFSDANKLGEGGFGPVYKGRLSYGQEVAVKRLSKNSLQGNTEFKNEVLLVAKLQHRNLVKLLGFCLERRERLLVYEFVPNKSLDFFIFDEDRREQLDWEKRYKIIIGIARGLLYLHQDSSVRIIHRDLKASNILLDAEMHPKISDFGMARLFEVDQSQANTSRVVGTYGYMAPEYVIHGQFSVKSDVFSFGVLVLEIVSGQKNSWVQRGENEGDLLTYTWQTWRKRTMSNIVDPTISGSSNEIMRCIHIALLCVQEKGDDRPTMASVALMLNSHSVTLPLPSKPAFSIDSTSLSVIQSNEPNIQSVNEASITEPFAR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0514 657 ProSiteProfiles Gnk2-homologous domain profile. 37 140 IPR002902 -
Pvu7g0514 657 CDD STKc_IRAK 348 612 - -
Pvu7g0514 657 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Pvu7g0514 657 SMART serkin_6 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0514 657 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 649 - -
Pvu7g0514 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pvu7g0514 657 ProSiteProfiles Protein kinase domain profile. 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0514 657 Gene3D Transferase(Phosphotransferase) domain 1 418 618 - -
Pvu7g0514 657 Pfam Protein tyrosine and serine/threonine kinase 346 608 IPR001245 GO:0004672|GO:0006468
Pvu7g0514 657 Gene3D - 36 139 IPR038408 -
Pvu7g0514 657 Gene3D - 150 252 IPR038408 -
Pvu7g0514 657 Pfam Salt stress response/antifungal 155 248 IPR002902 -
Pvu7g0514 657 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Pvu7g0514 657 Gene3D Phosphorylase Kinase; domain 1 304 417 - -
Pvu7g0514 657 SUPERFAMILY Protein kinase-like (PK-like) 332 636 IPR011009 -
Pvu7g0514 657 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 13 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0514 Pvu-Chr7 4021997 4025269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0514 17 626 Receptor kinase-like Gene Family AT4G05200 50.556 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0514 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0514 - - gmx:113000773 896.73