Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0506 ATGGCGGTCTCCTTCACGCTTATTCTCTTTCTTTCTTTTTCATTTCTTATATCTCTTGGCAGCGCTCAGAAGTACATATGTGATAACCGCAGCGGCAACTACACAGCCAACAGCATCTACAGCACCAACCTCAACACCCTTTTATCCACTCTCTCTTCCAACACACAAATTCATTACGGTTTCTACAACTTTTCATATGGCCAAAACACTGACACAGTATACGCCATAGGGCTCTGCAAAGGAGATGTTGAGCCAGAGGAGTGCCGCAGCTGCCTCAACAATTCCAGAATATATCTATCACATAGGTGTCCAAACCAGAAAAAGGCTATTATGTGGTCCGGTGATTGCATGTTGCGCTACTCTAACGACACAATATTCCTTAAAATGGAAACTTCTCCTACTTATTACTGGTGGAACGTAGGAAATGTAACAGAAGTGGATCAGTTCAATGAAGTGCTCGGGAACTTAATGACGAGCCTAAGAGACATAGCTGCATCAGGTGACTCCCGTCGTAAGTGTGCTGGGGGGAAAAATATATCTGGTTTAAACTTTCAAACCATATATGGTGTTGTGCAGTGCACCCCTAATTTGTCTCAGCAAGAATGTTATCAATGTTTAGATGTGGCTATATCAGAGATCCCAAACTGCTGCAGTGGCAAGATAGGTGGTAGAGTTCTTAAACCAAGTTGTAATATTAGATTCGAAATTTATAGCTTCTACGGAAATACAACTACATTAGATCCGGAGGCACCTCCTCCCTCCACCAATACCACTTCCTCCATCAATACCACTTCCTCACAAGAAAGTGACAACACAACAATAATTGTCATTGCCGTAGTGGTGCCAACTGTTGTCGTTGTTCTTTTCCTCATTTGTCTCTTCCTTTACTTAAGGAGGCTAAAGGCAAGAAAAAATCTTCCAGTTATAGAAGATGATGATGAGGATAAAATTAACATTGTTGAGTCATTGCAATTCAACTTTGACACTATACGAGTTGCTACCGAGGACTTTTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACTGGGGTAGGCTTTCCAATGGACAGATGATTGCAGTCAAAAGGTTGTCAAGAAATTCCGGGCAAGGAGATACGGAATTTAAGAATGAAGTGGTTTTAGTGGTCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTATCTATGAATTTGTTCCCAATAAAAGCCTTGATTACTTCATATTTGATCCAGCCATGAAAGCACAATTGGATTGGGGAAAGCGCTTCAAAATCATTACAGGTATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAGCTACGAATTATCCATCGAGATCTCAAAGCAGGCAACATTCTCTTAGACGAAGAGATGAATCCTAAGATAGCAGATTTTGGCACGGCAAGACTGGTTTTAATGGATCAAACTCAAGTAAATACAAACAGAATTGTTGGAACCTA 1508 0.4105 MAVSFTLILFLSFSFLISLGSAQKYICDNRSGNYTANSIYSTNLNTLLSTLSSNTQIHYGFYNFSYGQNTDTVYAIGLCKGDVEPEECRSCLNNSRIYLSHRCPNQKKAIMWSGDCMLRYSNDTIFLKMETSPTYYWWNVGNVTEVDQFNEVLGNLMTSLRDIAASGDSRRKCAGGKNISGLNFQTIYGVVQCTPNLSQQECYQCLDVAISEIPNCCSGKIGGRVLKPSCNIRFEIYSFYGNTTTLDPEAPPPSTNTTSSINTTSSQESDNTTIIVIAVVVPTVVVVLFLICLFLYLRRLKARKNLPVIEDDDEDKINIVESLQFNFDTIRVATEDFSDSNKLGQGGFGAVYWGRLSNGQMIAVKRLSRNSGQGDTEFKNEVVLVVKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPAMKAQLDWGKRFKIITGIARGLLYLHEDSQLRIIHRDLKAGNILLDEEMNPKIADFGTARLVLMDQTQVNTNRIVGT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0506 502 ProSiteProfiles Gnk2-homologous domain profile. 131 239 IPR002902 -
Pvu7g0506 502 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 502 - -
Pvu7g0506 502 SMART serkin_6 337 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0506 502 MobiDBLite consensus disorder prediction 245 266 - -
Pvu7g0506 502 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 502 - -
Pvu7g0506 502 SUPERFAMILY Protein kinase-like (PK-like) 320 502 IPR011009 -
Pvu7g0506 502 Pfam Salt stress response/antifungal 142 236 IPR002902 -
Pvu7g0506 502 Pfam Salt stress response/antifungal 27 122 IPR002902 -
Pvu7g0506 502 ProSiteProfiles Protein kinase domain profile. 337 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0506 502 ProSiteProfiles Gnk2-homologous domain profile. 22 125 IPR002902 -
Pvu7g0506 502 Gene3D Transferase(Phosphotransferase) domain 1 413 502 - -
Pvu7g0506 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pvu7g0506 502 Gene3D - 21 124 IPR038408 -
Pvu7g0506 502 Gene3D - 131 239 IPR038408 -
Pvu7g0506 502 Pfam Protein kinase domain 338 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0506 502 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Pvu7g0506 502 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0506 Pvu-Chr7 3977169 3979346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0506 5 502 Receptor kinase-like Gene Family AT4G05200 48.317 1.84e-152 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0506 Pkinase 2.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0506 - - var:108324785 713.375