LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g0505	ATGGCCATTATCATACCTATGGCTGCCATTTCTTGCATCCTTTCTTTGCTTCTCTCTTCTCTAATATCTCAAGTCAGCGCCCAGTTTAACACCGAATACTGTGATAACAACAAAGGGAACTACACAATCAATAGCACCTATCACAACAATCTCAACACCCTTCTATCCACGCTCTCTTCCCACACACAAATTAACTATGGTTTCTACAATTTCTCACATGGTCAAAACAATGACAAAGTAAACGCCATTGGGCTGTGCAGAGGAGATGTTAAGCCAGATGAGTGCCGCAGGTGCCTCAACGATTCTGCACTCACAATCACACAGCTTTGTCCAAACCAGAAAGAGGCACTTCTGTGGTTGAACACTAGCAAATGCCTGTTGCGTTATTCTCACCGCACAATATTCGGGGTCATGGAATCTTCTCCTGGCTTCTACTTGACCAACGTTAATAATGTAACGGAAGCAGATAAGTTCAACCAAGCACTCTCCAACTTAATGAGGAACCTCACAGTCGTGGCTGCATCAGGTGACTCTCGTCTTAAGTATGCTGCGGACAGTGCAATTGCTGCAAATTTTCAAACCGTATATGGTCTTGTGCAATGCACCCCTGATTTGTCTGAGACAGACTGCAATAGATGCTTGGATGGGGCTATCTCAGAAATCCCATCGTGTTGTGGGAACAAGATGGGTGGTAGAGTTCTCAGACCAAGTTGTAATATTAGATTCGAAAGCGCAATCTTCTACGATCAAACGCCTAAATTAGACCCTGATGTAACACCACCATCTCCACCTCCTTCCTCCTTCACTAACACTTCCCCCAAAGAAAGCAACAACACAATAACAATTGTCATCGCCGTTGTCGTTTCTATTGTTGTTGTTGCTGTCGTTTCCCTCCTTGGTCTCTGCATATATTTAAGGAGGAAGAAGGCAAGAAAAAGTCCAACAGTTAATCAAGATGATGATGATGACGACATTGAAATTTCTCAGTCATTGCAATTCGACTTCGACACAATACGAGTTGCTACAGAAGACTTCTCTAATTCTAATAAACTTGGACAAGGTGGATTTGGAGCAGTTTACAGGGGTAGGCTCCCCAATGGACAGATGATTGCAGTCAAAAGGTTGTCAAGTGGATCCAGCCAAGGAGACACAGAATTTAAGAATGAAGTGCTTTTAATGGCCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTATCTATGAATTTGTTCCTAACAAAAGCCTTGATTATTTCATATTTGATCCAGTCAAGAAAGCACAGTTGGATTGGGAAATGCGATACAAAATCATTAGAGGTATTGCCCGAGGGCTTCTCTACCTTCACGAAGATTCTCTTCTGCGTATTATACATCGTGATCTCAAAGCAAGCAATATTCTCTTAGACGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTGGTTTTACTGGATGAAACTCATGCAAATACAAATAGAGTTGTGGGAACCTATGGATATATGGCACCGGAGTATATAATGCAAGGACAATTTTCGGTGAAATCAGATATCTTTAGTTTTGGTGTATTGCTTCTTGAGATCGTAAGTGGCCAGAAAAACAGTGGCTTTCGTCATGGGGAGAATGTAGAGGATCTACTAAGCTTCACATGGAGAAACTGGAGGGATGGAACAGCCGTAAACATTGTAGATCCATCATTGGAAAACAATTCACGAAATGAAGTGATGAGATGCATACATATTGGTTTGCTCTGTGTTCAAGAAAATTTAACTGACAGACCAACCATGGCGACCATTATGCTCATGCTCAGTAGCTATTCTCTGGGTCTCCCCATTCCTTCTGAACCTGCATTTTATGCTAACAGTACAGCTCGAAGCCTTCCAGCCACGTCGTCATGGGGGCATAGTTCAAGGGCAACAGCAAACCAATCTGCTCAAGAGTCAGAAAATGAGAATTCAATCACTGAGCCGTATCCTCGCTAG	2019	0.4255	MAIIIPMAAISCILSLLLSSLISQVSAQFNTEYCDNNKGNYTINSTYHNNLNTLLSTLSSHTQINYGFYNFSHGQNNDKVNAIGLCRGDVKPDECRRCLNDSALTITQLCPNQKEALLWLNTSKCLLRYSHRTIFGVMESSPGFYLTNVNNVTEADKFNQALSNLMRNLTVVAASGDSRLKYAADSAIAANFQTVYGLVQCTPDLSETDCNRCLDGAISEIPSCCGNKMGGRVLRPSCNIRFESAIFYDQTPKLDPDVTPPSPPPSSFTNTSPKESNNTITIVIAVVVSIVVVAVVSLLGLCIYLRRKKARKSPTVNQDDDDDDIEISQSLQFDFDTIRVATEDFSNSNKLGQGGFGAVYRGRLPNGQMIAVKRLSSGSSQGDTEFKNEVLLMAKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPVKKAQLDWEMRYKIIRGIARGLLYLHEDSLLRIIHRDLKASNILLDEEMNPKIADFGMARLVLLDETHANTNRVVGTYGYMAPEYIMQGQFSVKSDIFSFGVLLLEIVSGQKNSGFRHGENVEDLLSFTWRNWRDGTAVNIVDPSLENNSRNEVMRCIHIGLLCVQENLTDRPTMATIMLMLSSYSLGLPIPSEPAFYANSTARSLPATSSWGHSSRATANQSAQESENENSITEPYPR*	673

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g0505	672	ProSiteProfiles	Gnk2-homologous domain profile.	140	247	IPR002902	-
	Pvu7g0505	672	MobiDBLite	consensus disorder prediction	639	672	-	-
	Pvu7g0505	672	Gene3D	Transferase(Phosphotransferase) domain 1	421	620	-	-
	Pvu7g0505	672	SUPERFAMILY	Protein kinase-like (PK-like)	333	646	IPR011009	-
	Pvu7g0505	672	ProSiteProfiles	Protein kinase domain profile.	345	630	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0505	672	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	17	657	-	-
	Pvu7g0505	672	CDD	STKc_IRAK	351	615	-	-
	Pvu7g0505	672	MobiDBLite	consensus disorder prediction	253	273	-	-
	Pvu7g0505	672	Pfam	Protein tyrosine and serine/threonine kinase	348	613	IPR001245	GO:0004672\|GO:0006468
	Pvu7g0505	672	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	466	478	IPR008271	GO:0004672\|GO:0006468
	Pvu7g0505	672	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	17	657	-	-
	Pvu7g0505	672	ProSiteProfiles	Gnk2-homologous domain profile.	29	134	IPR002902	-
	Pvu7g0505	672	Gene3D	-	143	247	IPR038408	-
	Pvu7g0505	672	Gene3D	-	17	133	IPR038408	-
	Pvu7g0505	672	ProSitePatterns	Protein kinases ATP-binding region signature.	351	373	IPR017441	GO:0005524
	Pvu7g0505	672	SMART	serkin_6	345	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0505	672	Pfam	Salt stress response/antifungal	34	131	IPR002902	-
	Pvu7g0505	672	Pfam	Salt stress response/antifungal	150	244	IPR002902	-
	Pvu7g0505	672	Gene3D	Phosphorylase Kinase; domain 1	309	420	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g0505	Pvu-Chr7	3971185	3974380	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g0505	10	672	Receptor kinase-like Gene Family	AT4G21410	47.877	0.0	623

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pvu7g0505		PK_Tyr_Ser-Thr	1.2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g0505	-		-	var:108324785	1035.02