Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0501 ATGGCAGCCGTCTCCTACATGCTTATTCTCTTTCTTTCTTTTCCATTTCTTAAATTTATATCTCTAGGCAGCGCCCAGAAAATTTTATGTGACGACGGCCACGGCAACTACACAGCCAACAGCACCTACAGCACCAACCTCAACACCCTCTTGTCCACTCTCTCTTCCAACACACAAATTGAATACGGTTTTTACAACTTTTCATATGGCCAAAACACTGACACAGTATACGCCATAGGGCTCTGTAGAGGAGATCAACAGCCAGAGGAGTGCCGCAGCTGCCTCAACAATTCCAGAGTCGATCTAACAGAGAGGTGTCCAAACCAGAAGAAGGCAATCATGTGGTCCGATCAATGCATGTTGCGCTACTCTAACTACACAATATTCCATCAAATGGAAACTTCTCCTCGTTATTACATGTGGAACACAGCAAATGCAACAGACGCGACTCAGTTCAATGAAGTGCTCGGGAACTTAATGAAGAGCCTAAAAGACACAGCTGCATCAGGTGACTCCCGTCGTAAGTATGCTACAGCGGAAAATGCAACTGGTTTAAATTTTCAAACCATATATGGGCTTGTGCAGTGCACCCCTGATTTGTCTCAGCAGGAGTGTACTCAATGCTTAGATGGGGTTATCTCAGAGATCCCAACCTGCTGCAATGGAAAGGTAGGTGGTAGAGTTCTTAGACCAAGTTGTAATATTAGATTCGAAACTTATAGCTTCTACGGAGCTACAACTACATTAGACCCAGATCCGGAGGCACCTCCTCCCTCCACCAATACCACTTCCTCACAAGAAAGTGACAACACAACAATAATTGTCATTGCCGTAGTGGTGCCAACTGTTGTCGTTGTTCTTTTCCTCATTTGTCTCTTCCTTTACTTAAGGAGGCTAAAGGCAAGAAAAAATCTTCCAGTTAAAGAAGAAGAGGAAGATGCCGATGAAGATGAAGGTGAAATTAAAATTGTTGAGTCATTGCAATTCAATTTTGACACAATACGAGTTGCTACAGCAGACTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACCGGGGTAAACTTCCCAATGGAGAGATAATTGCAGTCAAAAGGCTGTCAAGAAATTCCGGGCAAGGAGATACGGAATTTAAGAATGAAGTGGTTTTAGTGGTCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTGTCTACGAATTTGTTCCCAATAAAAGCCTTGATTATTTCATATTTGATCCAGCCATGAAAGCACAATTAGATTGGGAAAAGCGTTACAAAATCATTAGAGGTATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAGCTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGACCAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGACTGGTTTTAATGGATCAAACTCAAGCAAATACAAGTAGAATTGTTGGAACCTATGGATATATGGCACCGGAGTATGCAATGCAAGGACATTTTTCAGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAATAATGGAGAGAATATGGAAGATCTACTAAGCTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCTATAAATATTGTAGATCCGTCACTGAACAGCAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAAACATGACTAACATTATGCTGATGCTTAACAGCTATTCTCTGAGTCTCCCTATTCCGGCAGAACCAGCATTTTATATGAACAGTAGAACTAGAAGCCTTCCAGAGATGCAGTCATGGGATTATAATTCACGGGAAACAGGATCAAGTGAACCGATACTTAAATCGGCTCAAGAATCGGAAAATGAAGCTTCAATTACTGAGCTATACCCTCGCTAG 2022 0.4174 MAAVSYMLILFLSFPFLKFISLGSAQKILCDDGHGNYTANSTYSTNLNTLLSTLSSNTQIEYGFYNFSYGQNTDTVYAIGLCRGDQQPEECRSCLNNSRVDLTERCPNQKKAIMWSDQCMLRYSNYTIFHQMETSPRYYMWNTANATDATQFNEVLGNLMKSLKDTAASGDSRRKYATAENATGLNFQTIYGLVQCTPDLSQQECTQCLDGVISEIPTCCNGKVGGRVLRPSCNIRFETYSFYGATTTLDPDPEAPPPSTNTTSSQESDNTTIIVIAVVVPTVVVVLFLICLFLYLRRLKARKNLPVKEEEEDADEDEGEIKIVESLQFNFDTIRVATADFSDSNKLGQGGFGAVYRGKLPNGEIIAVKRLSRNSGQGDTEFKNEVVLVVKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPAMKAQLDWEKRYKIIRGIARGLLYLHEDSQLRIIHRDLKASNILLDQEMNPKIADFGMARLVLMDQTQANTSRIVGTYGYMAPEYAMQGHFSVKSDVFSFGVLILEIVSGQKNSGINNGENMEDLLSFAWRNWKEGKAINIVDPSLNSNSRNEMLRCIHIGLLCVQENLVDRPNMTNIMLMLNSYSLSLPIPAEPAFYMNSRTRSLPEMQSWDYNSRETGSSEPILKSAQESENEASITELYPR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0501 673 Gene3D Phosphorylase Kinase; domain 1 304 416 - -
Pvu7g0501 673 CDD STKc_IRAK 347 612 - -
Pvu7g0501 673 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 8 647 - -
Pvu7g0501 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Pvu7g0501 673 Coils Coil 307 327 - -
Pvu7g0501 673 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
Pvu7g0501 673 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 647 - -
Pvu7g0501 673 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Pvu7g0501 673 Pfam Protein tyrosine and serine/threonine kinase 344 608 IPR001245 GO:0004672|GO:0006468
Pvu7g0501 673 MobiDBLite consensus disorder prediction 639 666 - -
Pvu7g0501 673 Gene3D - 25 127 IPR038408 -
Pvu7g0501 673 Gene3D - 134 242 IPR038408 -
Pvu7g0501 673 MobiDBLite consensus disorder prediction 247 267 - -
Pvu7g0501 673 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pvu7g0501 673 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0501 673 Pfam Salt stress response/antifungal 30 126 IPR002902 -
Pvu7g0501 673 Pfam Salt stress response/antifungal 144 240 IPR002902 -
Pvu7g0501 673 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Pvu7g0501 673 MobiDBLite consensus disorder prediction 639 673 - -
Pvu7g0501 673 SUPERFAMILY Protein kinase-like (PK-like) 327 643 IPR011009 -
Pvu7g0501 673 ProSiteProfiles Protein kinase domain profile. 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0501 Pvu-Chr7 3945193 3948439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0501 4 673 Receptor kinase-like Gene Family AT4G21410 48.911 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0501 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0501 - - var:108324785 1067.76