Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0500 ATGGCAGCGCTCTCCTTCATGCTTATTCTCTTTTTTTCTTTTCCATTTCTTGTATCTCTTGGCAGCGCTCAGAAGTACGTATGTGATAAGGGCGGCAACTACACAGCCAACAGCACCTACAGCACCAACCTCAACACCCTTTTATCCACACTCTCTTCCAACACACAAATTGAATACGGTTTCTACAACTTTTCATATGGCCAAAACACTGACACAGTATACGCCATAGGGCTCTGTAGAGGAGATCAACAGCCAGAGCAGTGCCGCAGCTGCCTCAACAATTCCAGAGTCGATCTAACACAGAGGTGTCCAAACCAGAAAAAGGCAATTATGTGGTCCAGTGAATGCATGTTGCGCTACTCTAACGACACAATATTCAATCAAAAGGAAACTTTTCCTCGTTATTACTGGTGGAACACAGCAAAGGTAAGAGAAGTGGATGTGGATCAGTTCAATGAAGTGCTAGGGAACTTAATGAAGAGCCTAAGAGACATAGCTGCATCAGGTGACTCCCGTCGTAAGTATGCTGCGGGAAAAAATACAACTGGTTTAAACTTTCAAAACATATATGGTGTTGTGCAGTGCACCCCTGATTTGTCTCAGCAAGATTGTTATCAATGTTTAGATGGGGCCATCTCGGAGATCCCAAACTGCTGCAATGGCAAGATAGGTGGTAGAGTTCTTAAACCAAGTTGTAATCTTAGATTCGAAAGTAACAGCTTCTACGAAAATACAACTACATTAGACCCAGATCCGGAGGCACCTCCTCCCTCCACCAATACCACTTCCTCCACCAATAACACTTCTTCCACCAATAACACTTCCTCCACCAATACCACTTCCTCACAAGAAAGTGACAACACAACAATAATTGTCATTGCCGTAGTTGTGCCAACTGTTGTTGTTCTTTTCCTCATCTGTCTCTTCCTTTACTTAAGGAGGCTAAAGGCAAGAAAAAATCTTCCAGTTATAGAAGATGATGAAGATGAGGATGAAATTAACATTGTTGAGTCATTGCAATTCAACTTTGACACAATACGAGTTGCTACCGAGGACTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACTGGGGTAGGCTCTCCAATGGACAGATAATTGCAGTCAAAAGGTTGTCAAGAAATTCCGGGCAAGGAGATACGGAATTTAAGAATGAAGTGGTTTTAGTGGTCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTATCTATGAATTTGTTCCCAATAAAAGCCTTGATTACTTCATATTTGATCCAGCCATGAAAGCACAATTGGATTGGGGAAAGCGCTTCAAAATCATTACAGGTATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAGCTACGAATTATCCATCGAGATCTCAAAGCAGGCAACATTCTCTTAGACGAAGAGATGAATCCTAAGATAGCAGATTTTGGCACGGCAAGACTGGTTTTAATGGATCAAACTCAAGTAAATACAAACAGAATTGTTGGAACCTATGGATATATGGCACCGGAGTATGCATTGCACGGACAGTTTTCAGTGAAATCAGATGTCTTCAGTTTTGGTGTACTGATCCTTGAGATTGTAAGCGGGCAGAAAAATGGTGGAATTAGTAATAGAGAGAATATGGATGATCTACTGAGCTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCTATAAATATTGTAGATCCGTCACTGAACAGCAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAAACATGACTAACATTATGCTGATGCTTAACAGCTATTCTCTGAGTCTCCCTATTCCGGCAGAACCAGCATTTTATATGAACAGTAGAACTAGAAGCCTTCCAGAGATGCAGTCATGGGATTATAATTCACGGGAAACAGGATCAAGTGAAGCGATACTTAAATCGGCTCAAGAATCGGAAAATGAAGCTTCAATTACTGAGCTATACCCTCGCTAG 2058 0.4164 MAALSFMLILFFSFPFLVSLGSAQKYVCDKGGNYTANSTYSTNLNTLLSTLSSNTQIEYGFYNFSYGQNTDTVYAIGLCRGDQQPEQCRSCLNNSRVDLTQRCPNQKKAIMWSSECMLRYSNDTIFNQKETFPRYYWWNTAKVREVDVDQFNEVLGNLMKSLRDIAASGDSRRKYAAGKNTTGLNFQNIYGVVQCTPDLSQQDCYQCLDGAISEIPNCCNGKIGGRVLKPSCNLRFESNSFYENTTTLDPDPEAPPPSTNTTSSTNNTSSTNNTSSTNTTSSQESDNTTIIVIAVVVPTVVVLFLICLFLYLRRLKARKNLPVIEDDEDEDEINIVESLQFNFDTIRVATEDFSDSNKLGQGGFGAVYWGRLSNGQIIAVKRLSRNSGQGDTEFKNEVVLVVKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPAMKAQLDWGKRFKIITGIARGLLYLHEDSQLRIIHRDLKAGNILLDEEMNPKIADFGTARLVLMDQTQVNTNRIVGTYGYMAPEYALHGQFSVKSDVFSFGVLILEIVSGQKNGGISNRENMDDLLSFAWRNWKEGKAINIVDPSLNSNSRNEMLRCIHIGLLCVQENLVDRPNMTNIMLMLNSYSLSLPIPAEPAFYMNSRTRSLPEMQSWDYNSRETGSSEAILKSAQESENEASITELYPR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0500 685 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
Pvu7g0500 685 MobiDBLite consensus disorder prediction 664 685 - -
Pvu7g0500 685 MobiDBLite consensus disorder prediction 258 283 - -
Pvu7g0500 685 SMART serkin_6 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0500 685 Pfam Protein tyrosine and serine/threonine kinase 356 620 IPR001245 GO:0004672|GO:0006468
Pvu7g0500 685 MobiDBLite consensus disorder prediction 243 283 - -
Pvu7g0500 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pvu7g0500 685 SUPERFAMILY Protein kinase-like (PK-like) 336 623 IPR011009 -
Pvu7g0500 685 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Pvu7g0500 685 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 659 - -
Pvu7g0500 685 Gene3D - 132 241 IPR038408 -
Pvu7g0500 685 Gene3D - 22 124 IPR038408 -
Pvu7g0500 685 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0500 685 MobiDBLite consensus disorder prediction 664 678 - -
Pvu7g0500 685 ProSiteProfiles Gnk2-homologous domain profile. 131 241 IPR002902 -
Pvu7g0500 685 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 659 - -
Pvu7g0500 685 Pfam Salt stress response/antifungal 148 238 IPR002902 -
Pvu7g0500 685 Pfam Salt stress response/antifungal 28 122 IPR002902 -
Pvu7g0500 685 CDD STKc_IRAK 359 624 - -
Pvu7g0500 685 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
Pvu7g0500 685 ProSiteProfiles Gnk2-homologous domain profile. 22 125 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0500 Pvu-Chr7 3936728 3939851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0500 3 685 Receptor kinase-like Gene Family AT4G21410 47.845 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0500 PK_Tyr_Ser-Thr 5.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0500 - - gmx:100782800 944.11