Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0499 ATGGCAGCACTCTCCTTCATGCTTATTCTTTTTCTTTCTTTTACATTTCTAAAATTTATATCCCTAGGCAGCGCCCAGAACGTTATATGTGACGACGGCCACGGCAACTACACAGCCAACAGCACCTACAGCACCAACCTCAACACGCTTTTATCCACACTCTCTTCCAACACACAAATTGAATACGGTTTCTACAACTTTTCATATGGCCAAAACACTGACACAGTATACGCCATAGGGCTCTGCAGAGGAGACCAACAGCCAGAGGAGTGCCGCAGCTGCCTCAACAATTCCAGAGTCGATATAACAGAGAGGTGTCCAAACCAGAAAAAGGCAATTCTGTGGTCCGATCAATGCATGTTGCGCTACTCTAACGACACAATATTCAATCAAATGGAAATTTCTCCTACTTATTACATGTGGAACCAACCAAATGCAACAGACGCGAATCAGTTCAATGAAGTGCTCGGGAACTTAATGAAGAGCCTAATAGACACAGCTGCATCAGGTGACTCCCGTCGTAAGTATGCTACAGCGGAAAATGCAACTGGTTTAAATTTTCAAACCATATATGGGCTTGTGCAGTGCACCCCTGATTTATCTCAGCAAAGGTGTACTCAATGCTTAGATACGGCTATCTCAGAGATCCCAAACTGCTGCAATGGCAAGATAGGTGGTAGAGTTCTTAGACCAAGTTGTAATATTAGATTCCAAACTAACAGCTTCTACGGAAATCCAACTACATTAGACACAGATCCGGAGGCACCTCCTCCCTCCACCAATACCACTTCCTCACAAGAAAGTGACAACACAACAATAATTGCCATTGCGGTAGTTGTGCCTACTGTTGTTGTTGTTCTTTTCCTCATTTCTCTCTTCCTATACTTAAGGAGGTTGAAGGCAAGAAAAAATCTTGCAGTTAAAGAAGAAGATGACGTTGAAGATGAGGATGAAATTAAAATGGCTGAATCATTGCAATTCAACTTTGACACAATACGAGTTGCTACCGAGGACTTTTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCAGTTTACTGGGGTAGACTCCCCAATGGACAGATAATTGCAGTCAAAAGGCTGTCAAGAGATTCCGGGCAAGGACATACGGAATTTAAGAATGAAGTGGTTTTAGTGGTCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGACTACTTGTCTACGAATTTGTTCCCAATAAAAGCCTTGATTATTTCATATTTGATCCAACAATGAAAGCACAATTAGATTGGGAAAAGCGTTACAAAATCATTACAGGTATTGCTCGAGGTGTTCTCTACCTTCACGAAGATTCTCAGCTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGACCAAGAGATGAATCCCAAGATAGCAGATTTTGGCATGGCTAGACTGGTTTTAATGGATCAAACTCAAGCAAATACAAGTAGAATTGTTGGAACCTATGGATATATGGCACCGGAGTATGCAATGCACGGACATTTTTCAGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAATAATGGAGAGAATGTGGAAGATCTACTAAGCTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCTATATATATTGTAGATCCGTCACTGAACAGCAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACCATGGCTAACATTGTGCTGATGCTTAACAGCTATTCTCTGAGTCTCCCTATTCCTGCAGAACCAGCATTTTATATGAACAGTATAACTAGAAGCCTTCCAGAGATGCAGTCATGGGATTATAATTCACGGGAAACAAGATCAAGTGAATCAATACGTAAATCGGCTCAAGAATCAGAAAATGAAGCTTCAATTACTGAGCTATACCCTCGCTAG 2016 0.4137 MAALSFMLILFLSFTFLKFISLGSAQNVICDDGHGNYTANSTYSTNLNTLLSTLSSNTQIEYGFYNFSYGQNTDTVYAIGLCRGDQQPEECRSCLNNSRVDITERCPNQKKAILWSDQCMLRYSNDTIFNQMEISPTYYMWNQPNATDANQFNEVLGNLMKSLIDTAASGDSRRKYATAENATGLNFQTIYGLVQCTPDLSQQRCTQCLDTAISEIPNCCNGKIGGRVLRPSCNIRFQTNSFYGNPTTLDTDPEAPPPSTNTTSSQESDNTTIIAIAVVVPTVVVVLFLISLFLYLRRLKARKNLAVKEEDDVEDEDEIKMAESLQFNFDTIRVATEDFSDSNKLGQGGFGAVYWGRLPNGQIIAVKRLSRDSGQGHTEFKNEVVLVVKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPTMKAQLDWEKRYKIITGIARGVLYLHEDSQLRIIHRDLKASNILLDQEMNPKIADFGMARLVLMDQTQANTSRIVGTYGYMAPEYAMHGHFSVKSDVFSFGVLILEIVSGQKNSGINNGENVEDLLSFAWRNWKEGKAIYIVDPSLNSNSRNEMLRCIHIGLLCVQENLVDRPTMANIVLMLNSYSLSLPIPAEPAFYMNSITRSLPEMQSWDYNSRETRSSESIRKSAQESENEASITELYPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0499 671 SMART serkin_6 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0499 671 ProSiteProfiles Protein kinase domain profile. 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0499 671 Gene3D Transferase(Phosphotransferase) domain 1 415 616 - -
Pvu7g0499 671 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Pvu7g0499 671 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Pvu7g0499 671 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Pvu7g0499 671 Pfam Salt stress response/antifungal 145 239 IPR002902 -
Pvu7g0499 671 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 645 - -
Pvu7g0499 671 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
Pvu7g0499 671 MobiDBLite consensus disorder prediction 640 671 - -
Pvu7g0499 671 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Pvu7g0499 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pvu7g0499 671 Gene3D - 134 242 IPR038408 -
Pvu7g0499 671 Gene3D - 25 127 IPR038408 -
Pvu7g0499 671 SUPERFAMILY Protein kinase-like (PK-like) 325 642 IPR011009 -
Pvu7g0499 671 CDD STKc_IRAK 345 610 - -
Pvu7g0499 671 MobiDBLite consensus disorder prediction 244 267 - -
Pvu7g0499 671 Pfam Protein tyrosine and serine/threonine kinase 342 607 IPR001245 GO:0004672|GO:0006468
Pvu7g0499 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 645 - -
Pvu7g0499 671 Coils Coil 296 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0499 Pvu-Chr7 3931885 3934945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0499 30 671 Receptor kinase-like Gene Family AT4G21410 49.772 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0499 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0499 - - var:108324785 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0510 2 4617086 4620529 Pvu7g0499 7 3931885 3934945 PCT