Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0498 ATGGCCTCTGTGTCTTTCACCCTCTTTTCCTTTCTCCGTTGTCTCTGTGTCATCGTAATCTTAGCACAAAGCAGTGCCCAAACACCCTGTGACAACACCAAAGGCAACTACACAATAAACAGCACCTATCACAACAACCTCAACACCCTTTTATCCAGTTTCTCTTCCTACACACAAATCAACTACGGTTTCTACAATTTCTCATATGGCCAAGGTGAAGACAAAGTATACGCCATTGGGCTCTGCAGAGGCGATCTTAAGCCCGATGAGTGCCTTAAATCCCTCAATGATTCGAGAGTGTCTCTGGCAGAGCGTTGTCCAAACCAGAAGGAGGCCATTTGGTGGACGGTAGAGTGCATGTTGCGCTACACTAACCGCTCCATATTTGGCGTTATGGAAAACCAACCCACGAATAATAACTATTACAATTTGAATGTTACGGGTTCGGTGGAACAATTCAATACAGCGCTGGAGAGCTTGATGAGGAATCTAACACGCATAGCTGCATCAGGTGACTCTCGCCGTAAGTATGCTACTGCCAGTGCTTATGGTTCAGATTTTCAAACCATATACGGTCAAGCACAGTGTACTCCTGATTTGTCATCCGAAGATTGCACTAAGTGCTTGGATGAAGCTATCTCAATTATCCCACAGTGTTGTAGTGGCAAGGCCGGAGGCAATGTTGTAAAACCCAGTTGTAGAATTAGGTTTGACCCCTACTCCTTCTATGGCCCTACGCTGAATATAGACCTCGATGCGCCACCGTCACCGTCCACCAACAACACTTCTTCTTCACAAGGAAAGAGTAACACATCACGGACTATCATCGCCATAGTAGTTTCAGTTGCTTGTGTTGTTTTGGTGCTCACTCTTCTCTGCATCTATTTAAGACTGAGGAAGCAAAGAAAAAAAATTGAATTTGAAAGAGAAGAAGAAAGTGATGAAGATGAAATTTCATTTACTGAGCCATTGCAAAATAACTTCAACACCATACGTATTGCTACCAATGGATTCGCCGATTCTAATAAACTTGGACAAGGCGGGTTTGGAGCTGTTTACAAAGGTCAGCTTTCTAATGGACAAGAGATTGCTGTCAAAAGACTTTCAAGGGATTCTGGGCAAGGGGATTTGGAATTTAAGAATGAAGTGGTTTTATTGGCCAAGCTTCAGCATCGAAATTTGGTTAGGTTACTTGGCTTCGGCCTGGAAGGAAGAGAAAGGCTACTTGTCTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTAATATTTGATCCAACCATGAAACCACAATTGAACTGGGAAAAGCGCTACAAAATCATTAGAGGTATTGCTCGAGGCATTCTCTACCTTCACGAAGATTCTCGACTTCGGATAATACATCGTGATCTGAAAGCAAGTAATATTCTCTTGGACCATGAGATGAATCCTAAGATAGCAGATTTTGGTATGGCAAGACTAGTTTTAATGGATCAAACTCAAGCAAATACGAGTAGAATTGTTGGAACTTATGGATATATGGCACCAGAGTATGTAATGCATGGACAGTTTTCAGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAATAATGGAGAGAATATGGAGGATCTACTAAGCTTCGCTTGGAGAAGCTGGAAGGAGGGAAAGGCTATAAATGTTGTAGACCCATCACTGAACAACAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACCATGGCTAACATTGTACTGATGCTTAACAGTTATTCTCTGAGTCTCCCAATTCCTGCAGAACCAGCATTCTATATGAACAGTAGAACTAGAAGCCTTCCAGAGACGCAGTCATGGGAGTATAATTCAAGGGAAACAGGATCAAGTGAAGCGATACTTAAATCAGCTCAAGAATCAGAAAATGAAGCTTCAATTACTGAGTTATACCCTCGCTAG 2013 0.4178 MASVSFTLFSFLRCLCVIVILAQSSAQTPCDNTKGNYTINSTYHNNLNTLLSSFSSYTQINYGFYNFSYGQGEDKVYAIGLCRGDLKPDECLKSLNDSRVSLAERCPNQKEAIWWTVECMLRYTNRSIFGVMENQPTNNNYYNLNVTGSVEQFNTALESLMRNLTRIAASGDSRRKYATASAYGSDFQTIYGQAQCTPDLSSEDCTKCLDEAISIIPQCCSGKAGGNVVKPSCRIRFDPYSFYGPTLNIDLDAPPSPSTNNTSSSQGKSNTSRTIIAIVVSVACVVLVLTLLCIYLRLRKQRKKIEFEREEESDEDEISFTEPLQNNFNTIRIATNGFADSNKLGQGGFGAVYKGQLSNGQEIAVKRLSRDSGQGDLEFKNEVVLLAKLQHRNLVRLLGFGLEGRERLLVYEFVPNKSLDYLIFDPTMKPQLNWEKRYKIIRGIARGILYLHEDSRLRIIHRDLKASNILLDHEMNPKIADFGMARLVLMDQTQANTSRIVGTYGYMAPEYVMHGQFSVKSDVFSFGVLILEIVSGQKNSGINNGENMEDLLSFAWRSWKEGKAINVVDPSLNNNSRNEMLRCIHIGLLCVQENLVDRPTMANIVLMLNSYSLSLPIPAEPAFYMNSRTRSLPETQSWEYNSRETGSSEAILKSAQESENEASITELYPR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0498 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pvu7g0498 670 CDD STKc_IRAK 344 609 - -
Pvu7g0498 670 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 653 - -
Pvu7g0498 670 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Pvu7g0498 670 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 5 653 - -
Pvu7g0498 670 MobiDBLite consensus disorder prediction 634 663 - -
Pvu7g0498 670 Gene3D - 134 242 IPR038408 -
Pvu7g0498 670 Gene3D - 24 127 IPR038408 -
Pvu7g0498 670 SUPERFAMILY Protein kinase-like (PK-like) 324 640 IPR011009 -
Pvu7g0498 670 Gene3D Transferase(Phosphotransferase) domain 1 414 615 - -
Pvu7g0498 670 SMART serkin_6 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0498 670 Coils Coil 295 315 - -
Pvu7g0498 670 Gene3D Phosphorylase Kinase; domain 1 299 413 - -
Pvu7g0498 670 MobiDBLite consensus disorder prediction 634 670 - -
Pvu7g0498 670 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
Pvu7g0498 670 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Pvu7g0498 670 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Pvu7g0498 670 Pfam Salt stress response/antifungal 150 238 IPR002902 -
Pvu7g0498 670 Pfam Protein tyrosine and serine/threonine kinase 342 606 IPR001245 GO:0004672|GO:0006468
Pvu7g0498 670 ProSiteProfiles Protein kinase domain profile. 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0498 Pvu-Chr7 3925194 3928402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0498 34 670 Receptor kinase-like Gene Family AT4G21410 49.390 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0498 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0498 - - gmx:113000777 981.859