Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0496 ATGCCTCTGCTTTTGCCAAGGCTGCTTTTCTTTCTCTGGTGTCTTCCGATAACATTTTTTATATCTCAAGTTAGTGCAGTTAACAATACACAAAACTTCCACTACTTCTGTGATGATACCAACGATCAAGGAAACTACACCACCAACAGCACCTACCACACCAACCTCAACACCCTTTTGTCCACTCTCATTTCCAATACAGAAATCGATTACGGTTTCTACAATTTCACAAACGGTGAAAGCACTGATAAAGTGTACGCCATTGGGCTGTGTAGAGGAGACATCAAGCCAAATGAATGTCGCAGATGCCTTAACGGTTCCAGGGCCAATCTCACTGAACTTTGTCCAAACCGAAAGGAAGTTATTGGTTGGTACGAGGATGAGAGGTGCATGTTGCGCTACTCAGACCGCTCAATATTCGGCCTTATGGAAACTGGAAAACCTGCGTATTTTGCGTGGAATTTAGGTAATGCAACGCAAGCGGAGGAGTTCAATAAAGTGCTAAGGGATTTGCTTGATGGGATGAGAAGCAGAGCTGCATCAGGAGACTCTCAGAGTAAATATGCTACAGCAAATGCAACCGGACCAGATGACAAAACCATTTTCGGGCTTGCACAGTGTACGCCTGATTTGTCTGAACAAGATTGCAATAACTGCTTGATTCAGTCCATGGAAGAATTCGGAAATTGTTGTGATAGTAAAATAGGAGCTAGAGTTGTTCGACCCAGTTGCAATCTGAGATATGAAACTTCCTTTCCATTCTATGGGGCACCAGCATATACACCCTCGCCATCACTTTCGCCACCTTCTAACACTTCCTCAGAAGGAAAGAGTAACACAATTATCATCGCCATAGCAACAGCAGTGCCAGTTGTTGTAATTGTTTCCGCGGTGCTTATTTTTATCTACATTCGTTTAAAAGCGAGGAAGTCGGGGAAGAAGTTTGAAACTAAACAAGAAGAACTATATGATGATGATGATGATGATGGAATTGACGCTTCTGAGTCATTGCAAATCAGATTTAGTATCATACGAGAGGCTACAGATGACTTTTCTGATTCTAATAAACTCGGACAGGGTGGATTTGGGGCTGTTTACAGAGGTACGCTTCCCAATGGACAAGAGATTGCCGTCAAAAGGTTGTCAGCTAATTCTGGACAAGGAGATACAGAATTCAAGAATGAGGTTCTTCTATTGGCCAAACTTCAGCACCGAAATTTAGTTAGACTACTTCATTTCTGTATGGAAGGAAGAGAAAAGCTACTGGTCTATGAATTTGTTCCAAATAAAAGCCTTGATTACTTCATATTTGATGAAACCAAGAGAGCACAATTAGATTGGTATACGCGCTTCAAAATCATTGCAGGTACTGCTCGAGGTATTCTCTACCTCCATCAAGATTCTCGATTGCGCATTATCCATCGTGATCTCAAAGCAGGTAACATTCTCTTAGACGAAGACATGAACCCTAAGATAGCCGATTTTGGCTTGGCAAGGTTATTTGTTGTGGACCAGACTCATGAAGATACACAGAGAGTTGTTGGGACATATGGATATATGGCACCTGAGTATGCATTGCATGGACACTTCTCAGAGAAGTCAGATGTTTTTAGTTTTGGTGTACTTGTTCTTGAGATTGTAAGTGGCAAGAAAATCAGTAGCATTCAACATGGAGAGGAATCGGGCGATCTACGCCATATTGCATGGCGAAGTTGGAGGGAAGGAAGAGCTACAGATATTGTAGATCCGACATTAAACAATGGTTCGGAAAGTGAAATAATGAGATGCATGCATATTGGGTTACTGTGCGTTCAAGACAGTGTAGCTGCGAGACCCACCATGGCTTCCGTTGTACCCATGTTGAATAGCCATTCTTTCAGTCTGCAAGTACCTTTGGCACCTGCATTTTATGGGGATGCTATGTCTGGAATCTTTGAGGACATGAAGTTATGGGAGATTAATTCAGGGACAACAAGATCAATCGAATCCACCAATAGAAATGATCAAGATTCGCTCAATGAGGCTTCAATTACCGATCCATATCCTCGCTAG 2052 0.4225 MPLLLPRLLFFLWCLPITFFISQVSAVNNTQNFHYFCDDTNDQGNYTTNSTYHTNLNTLLSTLISNTEIDYGFYNFTNGESTDKVYAIGLCRGDIKPNECRRCLNGSRANLTELCPNRKEVIGWYEDERCMLRYSDRSIFGLMETGKPAYFAWNLGNATQAEEFNKVLRDLLDGMRSRAASGDSQSKYATANATGPDDKTIFGLAQCTPDLSEQDCNNCLIQSMEEFGNCCDSKIGARVVRPSCNLRYETSFPFYGAPAYTPSPSLSPPSNTSSEGKSNTIIIAIATAVPVVVIVSAVLIFIYIRLKARKSGKKFETKQEELYDDDDDDGIDASESLQIRFSIIREATDDFSDSNKLGQGGFGAVYRGTLPNGQEIAVKRLSANSGQGDTEFKNEVLLLAKLQHRNLVRLLHFCMEGREKLLVYEFVPNKSLDYFIFDETKRAQLDWYTRFKIIAGTARGILYLHQDSRLRIIHRDLKAGNILLDEDMNPKIADFGLARLFVVDQTHEDTQRVVGTYGYMAPEYALHGHFSEKSDVFSFGVLVLEIVSGKKISSIQHGEESGDLRHIAWRSWREGRATDIVDPTLNNGSESEIMRCMHIGLLCVQDSVAARPTMASVVPMLNSHSFSLQVPLAPAFYGDAMSGIFEDMKLWEINSGTTRSIESTNRNDQDSLNEASITDPYPR* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0496 683 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Pvu7g0496 683 SMART serkin_6 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0496 683 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Pvu7g0496 683 Gene3D Transferase(Phosphotransferase) domain 1 427 629 - -
Pvu7g0496 683 MobiDBLite consensus disorder prediction 660 676 - -
Pvu7g0496 683 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 665 - -
Pvu7g0496 683 CDD STKc_IRAK 357 622 - -
Pvu7g0496 683 SUPERFAMILY Protein kinase-like (PK-like) 337 621 IPR011009 -
Pvu7g0496 683 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 665 - -
Pvu7g0496 683 MobiDBLite consensus disorder prediction 660 683 - -
Pvu7g0496 683 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0496 683 Pfam Protein kinase domain 352 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0496 683 Gene3D - 33 138 IPR038408 -
Pvu7g0496 683 Gene3D - 148 252 IPR038408 -
Pvu7g0496 683 Pfam Salt stress response/antifungal 37 136 IPR002902 -
Pvu7g0496 683 Pfam Salt stress response/antifungal 157 250 IPR002902 -
Pvu7g0496 683 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Pvu7g0496 683 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Pvu7g0496 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0496 Pvu-Chr7 3909025 3913620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0496 7 636 Receptor kinase-like Gene Family AT4G21410 48.848 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu7g0496 Pkinase 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0496 - - var:108324787 1007.28