Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0475 ATGTCTCACTCGCCGGACTCTCCCTCCGCCGCTTCTAACTTCCTCTGCCGCGAACACGCCATCGAAGTCACCTCCGACCACCACCACCCGCCGACACCTCCCTTCCCGGATTCCGATGACCTGCCCATCACCTGCCTCCTCGACGCCGAGCTCCACCACATGCCCGAGAAGGACTACCTCCGCCGCTGCCGCGACCGCGCCATCGACGTCACCGCGCGACTCGACGCCATCAACTGGATCTTAAAGGTCCACGCATTCTACCAGTTTTCTCCGGTGACTGCATTTCTCTCCGTCAACTATTTGGACCGTTTCCTCTCTCTATGTTCTCTTCCCCAACCGAGTAGGTGGCCGTTCCAGCTGCTATCAGTGGCATGCCTGTCTCTCGCTGCGAAAATGGAAGAGTCTCGTGTGCCGTGCTTACTCGACCTGCAACTGTTCGAACCTGAATTCGTGTTTGCTCCCAAAACCGTTCAGAGAATGGAGCTTTGGGTCATGTCCAATCTCAAATGGAGACTACGCTCCGTCACGCCCTACGCTTATCTTCACTATTTCATCAACAAGCTCCCTTCTTCCTCTTCCTCCTCCTCCGAATCCACGAATCAGTTTTTCTCCACCGCCTCCAATCTCATCCTTAGCACCACCCGTGTGATTAACTTCTTGGGATTTGCGCCCTCCACGGTGGCAGCCGCCGCCGTTCTCTGCGCAGCTGGCCGTGGCATTGCTTCCGCGGACGCCCAATTGTCGCCGAGTTTTCATGATAGAGTAAACAATGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTTACGCATCTTGCTCCACCATCAAAGCGAGACTAGCCGAGTCGCCGCCACCATCGAGCCCAATTGGCGTGCTCGACGCTGCCACATGTGTCAGCTGCGACACACCTTCCGAGAGAAATCTCCTCGGCTCAGCTGAATCACAACAGCGAGAAGCCGAGCCACCAAATAAACGGCTTCGATCCACTGCTCCGGATGCACCCCAGCGGTAG 1032 0.564 MSHSPDSPSAASNFLCREHAIEVTSDHHHPPTPPFPDSDDLPITCLLDAELHHMPEKDYLRRCRDRAIDVTARLDAINWILKVHAFYQFSPVTAFLSVNYLDRFLSLCSLPQPSRWPFQLLSVACLSLAAKMEESRVPCLLDLQLFEPEFVFAPKTVQRMELWVMSNLKWRLRSVTPYAYLHYFINKLPSSSSSSSESTNQFFSTASNLILSTTRVINFLGFAPSTVAAAAVLCAAGRGIASADAQLSPSFHDRVNNEMVRCCHQLMEEYVVDTCYASCSTIKARLAESPPPSSPIGVLDAATCVSCDTPSERNLLGSAESQQREAEPPNKRLRSTAPDAPQR* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0475 343 CDD CYCLIN 73 162 IPR013763 -
Pvu7g0475 343 SUPERFAMILY Cyclin-like 43 172 IPR036915 -
Pvu7g0475 343 SMART cyclin_7 78 166 IPR013763 -
Pvu7g0475 343 Gene3D - 46 265 - -
Pvu7g0475 343 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Pvu7g0475 343 SMART Cyclin_C_2 175 307 IPR004367 -
Pvu7g0475 343 MobiDBLite consensus disorder prediction 313 343 - -
Pvu7g0475 343 Pfam Cyclin, C-terminal domain 175 274 IPR004367 -
Pvu7g0475 343 Pfam Cyclin, N-terminal domain 44 172 IPR006671 -
Pvu7g0475 343 PANTHER CYCLINS 24 328 IPR039361 -
Pvu7g0475 343 Gene3D - 56 173 - -
Pvu7g0475 343 PANTHER CYCLIN-D2-1-LIKE 24 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0475 Pvu-Chr7 3731781 3733953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0475 43 296 Core Cell Cycle Gene Families AT1G70210 41.699 4.83e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0475 K18810 - gmx:100776178 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0475 7 3731781 3733953 Pvu7g0475 7 3731781 3733953 ECH