Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0451 ATGAGCTGCAATGGTTGTCGTGTTCTCAGAAAGGGTTGCAGTGAGAACTGCATGCTACGACATTGCCTACAATGGATAGAGAACCCACAAGCCCAAGCTCACGCCACCCTCTTTGTGGCCAAGTTCTTTGGCCGTGCTGCGCTCATGTCTTTCCTTTCCTCCGTACCTGCCAACCAAAGATCCGCTTTGTTTCAGTCACTGCTTTATGAAGCAGTGGGGCGTACTATAAATCCAGTGAATGGAGCAGTGGGGCTGTTGTGGACTGGGAACTGGCAGCTGTGCCAAATGGGTGTGGAGAAAGTGCTCCGAGGTGGTGCTGAGTTGACCCCACTCCCTCACTTCTTGAGTAGTGCAGATGAACACCATGTAACTGAGAGAGTGATGGTTGGAGGTGGAATATTGTGTCACCAGGCAAAGAAGCAACGTGTGGGGACAACCTCTCAGGAATCAGAGACCTCCTATTTGGGACGTAAACCACAGGATTGTGCTCCTCAAAGTCAAAGAAACCTCCTTACACTATTCTTATGA 528 0.5 MSCNGCRVLRKGCSENCMLRHCLQWIENPQAQAHATLFVAKFFGRAALMSFLSSVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWQLCQMGVEKVLRGGAELTPLPHFLSSADEHHVTERVMVGGGILCHQAKKQRVGTTSQESETSYLGRKPQDCAPQSQRNLLTLFL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0451 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 175 - -
Pvu7g0451 175 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Pvu7g0451 175 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pvu7g0451 175 PANTHER LOB DOMAIN PROTEIN 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0451 Pvu-Chr7 3508488 3510206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0451 1 116 AS2 family AT3G49940 75.862 1.29e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu7g0451 LOB 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0451 - - vra:106772384 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0451 7 3508488 3510206 Pvu7g0451 7 3508488 3510206 ECH
Pvu2g0124 2 1403702 1405256 Pvu7g0451 7 3508488 3510206 PCT