Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0441 ATGGGTGATGCACTAAATGAAGTGCAGCACAGGGGTGGTGTACCTGCTACTTCTCCCAAGAGGGACATTGCATTGTTTGAAGGAGACAAGGATTTTGAGCCGCACAATGGCATTGAATTTGAATCCCATGAAGCAGCATATTTATTTTATCAGGAATATGCCAAATCTATGGGATTCACTACTTCAATAAAAAATAGCAGGCGCTCAAAGAAAACGAAAGAATTTATTGATGCCAAATTTGCATGCTCTAGGTATGGTGTTACGCCTGAGACTGACAGTGGGAGCAGTCGAAGACCAAGTGTAAAGAAAACAGATTGCAAAGCTTGCATGCACGTGAAGAGGAAGGCAGATGGAAAGTGGATCATTCATGAATTTATAAAGGAACATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAATTAGCTGAAAAGAATAATATTGATATTTTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCAAGGCAATCTGGAGGCTGTCAGAACATCGGGTCTTTCTTAAGCGATATAAATTATCAGTTTGACAGAGGCCAGTATTTGGCTTTGGAAGAAGGAGATGCCCAAATTATGCTTGAGTATTTTAAGCATGTACAAAAGGAGAGTCCCAACTTCTTCTATTCTATAGATTTAAATGAAGAGCAGCGCTTAAGAAATCTATTTTGGATTGATGCAAAAAGTATCAATGATTATCTCAGCTTTAATGATGTAGTTTCATTTGATACCACTTACATAAAAAGCAATGACAAGTTGCCGTTTGCACCTTTCGTCGGAGTGAACCACCACTCTCAACCTATATTGCTTGGATGTGCATTGGTTGCAGATGAGACTAAGCCAACATTTGTTTGGTTAATGAAGACATGGCTTAGAGCTATGGGTGGGAAAGCTCCCAAGGTTATAATTACTGATCAAGACAAAGCCTTGAAGGCAGCAATTGAAGAAGTATTTCCGAATGTACGTCATTGTTTTTCTCTTTGCCACATACTAGAGAGGATACCAGAAAATCTCTCTTTTGTGATCAAACAGCACAACAACTTCTTACCAAAATTTAACAAGTGCATTTTTAAATCATGGACAGATGAACAGTTTGACATGAGATGGTGGAAAATGGTCAGTATATGTGAACTCCAAGATGATATATGGTTTCAGTCATTGTATGAGGACCGGAAAAAGTGGGTGCCAACTTACATGGGGGATGCCTTTTTAGCTGGAATGTCTACACCTCAGCGCTCTGAAAGTACGAGCTCTTTCTTTGACAAGTATATTCATAAGAAAATTACCCTTAAAGAGTTTGTAAAACAATATGGGACAATTCTTCAGAATAGGTATGATGAGGAAGCCATTGCGGATTTTGAATCATTGCACAAACAGCCAGCACTTAAATCTCCTTCACCTTGGGAAAAGCAAATGTCAACGGTTTACACACATGCAATATTTAAGAAATTTCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGGATAGAGGATGGAGATGGAACGGTTGCAAAGTTCATAGTTCAAGATTATGAGAAGGATGAAGAGTTTTTGGTAACTTGGAATGAAATGAGCTCAGAGGTCTCTTGCTTTTGTCGATTGTTTGAATATAAAGGTTTCCTTTGCAGGCATGCTTTGAGTGTTCTCCAACGTTGTGGTTGTTCGAGTGTTCCATCTCATTATATCTTGAAGAGGTGGACGAAAGATGCCAAAATTAAGGAATCAATGGCAGATAGGACAAGAAGGATACAAACTAGGGTGCAACGTTATAATGACTTGTGTAAACGAGCTATCGATTTAAGTGAAGAAGGATCATTATCTGAAGAGAATTACAGTGTTGTTTTTCGTGCACTTGTTGATGCCTTGAAGAATTGTGTACTCGTGAATAATTCTAATAACAGCGGTGCAGAAACTAGCAATAATGCCTATGGCTTTCGTGAAGCAGAAGAAAATCAGGTTCCTCTCGCTTTGAAACCAAATAAAAAGAGGAACGCAGCTAGGAAAAGAAAGGCACAATTAGAGCAAGATGTTATACTTGTTAATGCTCAAGATAGCCTGCAGCAAATGGATAATCTTAGCTCGGATGCAATGACCCTTAATGGATATTATGGTACCCAGCAGAATGTGCAAGGACTGCAGGTACAATTGAACTTGATGGAGCCTCCTCATGATGGTTACTATGTTAATCAACAGGGCATGCAAGGCCTGGGTCCTTTGAATTCCATGGCTCCAAGCCATGATGGGTTTTTTGGCACACAGCAAAGCATTCATGGGCTGGGAGGGCAATTGGAATTTCGTCCAGCAACTACTTTTGGATATAGCCTTCAGGATGAACCTGATCCCCAGTTTCATGGCAACAGTTCAAGAAATACTTAG 2430 0.3947 MGDALNEVQHRGGVPATSPKRDIALFEGDKDFEPHNGIEFESHEAAYLFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPETDSGSSRRPSVKKTDCKACMHVKRKADGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCQNIGSFLSDINYQFDRGQYLALEEGDAQIMLEYFKHVQKESPNFFYSIDLNEEQRLRNLFWIDAKSINDYLSFNDVVSFDTTYIKSNDKLPFAPFVGVNHHSQPILLGCALVADETKPTFVWLMKTWLRAMGGKAPKVIITDQDKALKAAIEEVFPNVRHCFSLCHILERIPENLSFVIKQHNNFLPKFNKCIFKSWTDEQFDMRWWKMVSICELQDDIWFQSLYEDRKKWVPTYMGDAFLAGMSTPQRSESTSSFFDKYIHKKITLKEFVKQYGTILQNRYDEEAIADFESLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSRIEDGDGTVAKFIVQDYEKDEEFLVTWNEMSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYILKRWTKDAKIKESMADRTRRIQTRVQRYNDLCKRAIDLSEEGSLSEENYSVVFRALVDALKNCVLVNNSNNSGAETSNNAYGFREAEENQVPLALKPNKKRNAARKRKAQLEQDVILVNAQDSLQQMDNLSSDAMTLNGYYGTQQNVQGLQVQLNLMEPPHDGYYVNQQGMQGLGPLNSMAPSHDGFFGTQQSIHGLGGQLEFRPATTFGYSLQDEPDPQFHGNSSRNT* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0441 809 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 12 724 - -
Pvu7g0441 809 Pfam SWIM zinc finger 545 570 IPR007527 GO:0008270
Pvu7g0441 809 Pfam FAR1 DNA-binding domain 49 135 IPR004330 -
Pvu7g0441 809 MobiDBLite consensus disorder prediction 1 20 - -
Pvu7g0441 809 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Pvu7g0441 809 Coils Coil 681 701 - -
Pvu7g0441 809 Pfam MULE transposase domain 255 348 IPR018289 -
Pvu7g0441 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 724 IPR031052 GO:0006355
Pvu7g0441 809 MobiDBLite consensus disorder prediction 790 809 - -
Pvu7g0441 809 SMART 26again6 546 573 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0441 Pvu-Chr7 3456378 3461625 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu7g0441 MULE 2.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0441 - - gmx:100805377 1550.41