Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu7g0438 | ATGACGAGCGCTTCGGAGCTATTCCACACCAGAAGACATCGATTGGGACGAAATTCTCTCGATCTAGGGTTCGACACAGAACTCCAAGCCGCCGATTCTTTCCGCCGTCACTACCACGCCCGCCGCCTCCGTCACCACCTGGAGCGTGCATCTGATAGAATCAGTGCGAGGTCTCGGCGGACTTTCGTAAGTGATAGCGTTGATTCTGAAGAAAATGTAAGAGGCAGTCTTGTAGGGAGTGTCAGTGAGAGATTACCAGTGGGTGTGATTCTTGCACGGACCAGACTCCTTCAGAGGTTGAGAGGGGAACCTCTTTCTAGAAACAGGCAACATGGTAGAGATTCTGTAGGTGAGGATCGGGAAAGTGAATCACCAAATGAAGTTGCAACTGGGACTACTTTAGTTACTGACTTGACTTCTCAGATGGGAAGGTCCCAGTTCTTGCAGGAACTAAACAAAAAGCCACCTGGACTTACTCAGGAGGCCTTGGGCTGTTTGGATCAGGAAGTTTTTAGCAGCAGCGAGACAGGATTGGAATCCAGGATAATGCAAGACTGTAGTATATGTTTGGAAACTTTCACAGATGGAGATGAGCTGATACGTCTGCCATGTGGACATAAATTCCACTCTGTTTGTTTGGATCCATGGATTCGCTCTTGTGGAGACTGCCCCTACTGTCGAAGGCGTGTAGTTCTAAATACTCACTTACCATAA | 714 | 0.4832 | MTSASELFHTRRHRLGRNSLDLGFDTELQAADSFRRHYHARRLRHHLERASDRISARSRRTFVSDSVDSEENVRGSLVGSVSERLPVGVILARTRLLQRLRGEPLSRNRQHGRDSVGEDRESESPNEVATGTTLVTDLTSQMGRSQFLQELNKKPPGLTQEALGCLDQEVFSSSETGLESRIMQDCSICLETFTDGDELIRLPCGHKFHSVCLDPWIRSCGDCPYCRRRVVLNTHLP* | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu7g0438 | 237 | Pfam | Ring finger domain | 185 | 227 | IPR001841 | - | |
Pvu7g0438 | 237 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED | 1 | 232 | - | - | |
Pvu7g0438 | 237 | ProSiteProfiles | Zinc finger RING-type profile. | 186 | 227 | IPR001841 | - | |
Pvu7g0438 | 237 | PANTHER | SI:CH211-59O9.10 | 1 | 232 | - | - | |
Pvu7g0438 | 237 | MobiDBLite | consensus disorder prediction | 103 | 130 | - | - | |
Pvu7g0438 | 237 | CDD | RING-H2_PA-TM-RING | 185 | 227 | - | - | |
Pvu7g0438 | 237 | MobiDBLite | consensus disorder prediction | 103 | 125 | - | - | |
Pvu7g0438 | 237 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 143 | 231 | IPR013083 | - | |
Pvu7g0438 | 237 | SUPERFAMILY | RING/U-box | 185 | 233 | - | - | |
Pvu7g0438 | 237 | SMART | ring_2 | 186 | 226 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu7g0438 | Pvu-Chr7 | 3438168 | 3440577 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu7g0438 | 1 | 231 | C3H Transcription Factor Family | AT1G49850 | 41.473 | 5.70e-44 | 146 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu7g0438 | - | - | gmx:100814695 | 359.377 |