Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0438 ATGACGAGCGCTTCGGAGCTATTCCACACCAGAAGACATCGATTGGGACGAAATTCTCTCGATCTAGGGTTCGACACAGAACTCCAAGCCGCCGATTCTTTCCGCCGTCACTACCACGCCCGCCGCCTCCGTCACCACCTGGAGCGTGCATCTGATAGAATCAGTGCGAGGTCTCGGCGGACTTTCGTAAGTGATAGCGTTGATTCTGAAGAAAATGTAAGAGGCAGTCTTGTAGGGAGTGTCAGTGAGAGATTACCAGTGGGTGTGATTCTTGCACGGACCAGACTCCTTCAGAGGTTGAGAGGGGAACCTCTTTCTAGAAACAGGCAACATGGTAGAGATTCTGTAGGTGAGGATCGGGAAAGTGAATCACCAAATGAAGTTGCAACTGGGACTACTTTAGTTACTGACTTGACTTCTCAGATGGGAAGGTCCCAGTTCTTGCAGGAACTAAACAAAAAGCCACCTGGACTTACTCAGGAGGCCTTGGGCTGTTTGGATCAGGAAGTTTTTAGCAGCAGCGAGACAGGATTGGAATCCAGGATAATGCAAGACTGTAGTATATGTTTGGAAACTTTCACAGATGGAGATGAGCTGATACGTCTGCCATGTGGACATAAATTCCACTCTGTTTGTTTGGATCCATGGATTCGCTCTTGTGGAGACTGCCCCTACTGTCGAAGGCGTGTAGTTCTAAATACTCACTTACCATAA 714 0.4832 MTSASELFHTRRHRLGRNSLDLGFDTELQAADSFRRHYHARRLRHHLERASDRISARSRRTFVSDSVDSEENVRGSLVGSVSERLPVGVILARTRLLQRLRGEPLSRNRQHGRDSVGEDRESESPNEVATGTTLVTDLTSQMGRSQFLQELNKKPPGLTQEALGCLDQEVFSSSETGLESRIMQDCSICLETFTDGDELIRLPCGHKFHSVCLDPWIRSCGDCPYCRRRVVLNTHLP* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0438 237 Pfam Ring finger domain 185 227 IPR001841 -
Pvu7g0438 237 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATED 1 232 - -
Pvu7g0438 237 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
Pvu7g0438 237 PANTHER SI:CH211-59O9.10 1 232 - -
Pvu7g0438 237 MobiDBLite consensus disorder prediction 103 130 - -
Pvu7g0438 237 CDD RING-H2_PA-TM-RING 185 227 - -
Pvu7g0438 237 MobiDBLite consensus disorder prediction 103 125 - -
Pvu7g0438 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 231 IPR013083 -
Pvu7g0438 237 SUPERFAMILY RING/U-box 185 233 - -
Pvu7g0438 237 SMART ring_2 186 226 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0438 Pvu-Chr7 3438168 3440577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0438 1 231 C3H Transcription Factor Family AT1G49850 41.473 5.70e-44 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0438 - - gmx:100814695 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0438 7 3438168 3440577 Pvu7g0438 7 3438168 3440577 ECH