Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0437 ATGCTGCGTCTGTGCTACGGTCCTCTCGATTGCTGCTTCCGACGCCGTGGTGGACGCGCCGCCGACGGACTACTCTGGCACACTGACTTGAAGCCCCACGCCTCCGGCGACTTCTCCATCGCCGTCGCACAGGCCAATTACAGTCTCGAGGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCTACCTACGTCGGCGTCTATGACGGCCACGGCGGCCCCGAAGCTTCTAGATTCGTCAACAAAAGACTCTTCCCTTATTTGCACAAATTTGCCACTGAGCAAGGGGGTTTGTCTGTGGATGTGATTAAAAAGGCATTTAGTGCCACAGAGGAGGAATTCTTGCATTTGGTGAAGCTATCCTTGCCCATTAGTCCTCAGATTGCTTCTGTGGGGTCCTGTTGCCTTTTTGGTGCAATTACTAATAATGTGTTGTATGTTGCCAACCTCGGAGACTCTAGAGCTGTTCTTGGCAGGAGGGCTGTAGAGAGAAAGAACAGTCCAGTGGTGGCACAGCGCTTGTCAACTGATCATAATGTAGCTGATGTGGAGGTGAGGAGAGAAGTTGAAGCTCTCCATCCTGATGACTCACACATAGTGGTTTATAGCCGAGGAGTTTGGAGGATAAAGGGCATTATTCAGGTGTCAAGATCCATTGGTGATGTGTATTTGAAAAAACCTGATTTCTACCGAGACCCTGTTTTTCAGCAATATGGAAATCCTGTTCCTTTGAAGCGTCCCGTGATGACAGCCGAACCATCAATCATTATTAGGGAGCTTGAGTCGGAGGATTTATTCTTGATATTTGCTTCCGATGGCCTGTGGGAACAATTAAGTGATGAAGCAGCAGTTCAGATTGTTTTCAAGTATCCAAGAGCTGGAATTGCCAAGAGACTGGTGAGAGCTGCTCTTCAAGAAGCTGCAAAGAAGAGAGAGATGAGATATGATGACATAAAGAAAATCGACAAAGGAATAAGACGACACTTCCATGATGATATCACTGTGATTGTAATCTATCTTGACCACCATGCGGGATCCTCTAATAGTAGATTCAAGCAAACTGCTGTCGGCTATACAACTGCCCCTGTTGATATTTTTTCCCTAAATGTGGACGAAGCAGAAGCAGAAAAGAGAATGCTTGGGGCAGTTGCCTAA 1152 0.4757 MLRLCYGPLDCCFRRRGGRAADGLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLFGAITNNVLYVANLGDSRAVLGRRAVERKNSPVVAQRLSTDHNVADVEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQYGNPVPLKRPVMTAEPSIIIRELESEDLFLIFASDGLWEQLSDEAAVQIVFKYPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHHAGSSNSRFKQTAVGYTTAPVDIFSLNVDEAEAEKRMLGAVA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0437 383 SMART PP2C_4 31 337 IPR001932 -
Pvu7g0437 383 CDD PP2Cc 50 339 IPR001932 -
Pvu7g0437 383 ProSiteProfiles PPM-type phosphatase domain profile. 37 339 IPR001932 -
Pvu7g0437 383 SUPERFAMILY PP2C-like 46 341 IPR036457 -
Pvu7g0437 383 Pfam Protein phosphatase 2C 58 308 IPR001932 -
Pvu7g0437 383 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Pvu7g0437 383 Gene3D - 28 349 IPR036457 -
Pvu7g0437 383 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 375 - -
Pvu7g0437 383 PANTHER ALPHABET, ISOFORM E-RELATED 4 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0437 Pvu-Chr7 3425463 3428670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0437 22 346 PP2C-type Phosphatase Gene Family AT3G51370 57.958 3.11e-141 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0437 - K01102 gmx:100812137 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0437 7 3425463 3428670 Pvu7g0437 7 3425463 3428670 ECH
Pvu2g0139 2 1528770 1534129 Pvu7g0437 7 3425463 3428670 PCT