Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0428 GTCATTCCATCCATATTTGCTAAAAAGTATTTAAAGAAAGAGGGAATACATGATGTCCTCCTTCGGGTCTTGGATGGGAGAACTTGGCACGTTTCATTAAAGGATGAAAAATTTCACAAAGGATGGAAGTATTTTGCATCCGATAATCGTTTGAATATTGGGGATAATTGTACTTTTGACCTAACCGAGAGTCAAGGTCTATGTTTTAAAGTATCAATAATTCGAATTTCACAAGATACGACTTCACAAGGTAATCTTAGTAGGTCATTCTTTCAAATTACACTATATTATTTGTGCAAAAATGATTGTAGTTTTCTTCCTTTGAATAAGGTGATGAAAAAGTATAATTTGATGCAGCGTGTACCAATTGCGTTTCTGAGAAGGTACCTCCAGAATAAGCAGGTTGTGATGTTACAATTTGGAAATAAAACATGGGAGATAGGACTCAGTGGTGCAATTCAAACAAAGATGTCTAATGGTTGGTCCCAATTTGCGAAGGAATGTAAGGTTCAGCACGAAGATGTTTGCGTCTTTGAGTTAATAAACATAAAAGATGGAGTGCTTGATGTTCACATATTTAGGAAACAATCTTAA 594 0.3502 VIPSIFAKKYLKKEGIHDVLLRVLDGRTWHVSLKDEKFHKGWKYFASDNRLNIGDNCTFDLTESQGLCFKVSIIRISQDTTSQGNLSRSFFQITLYYLCKNDCSFLPLNKVMKKYNLMQRVPIAFLRRYLQNKQVVMLQFGNKTWEIGLSGAIQTKMSNGWSQFAKECKVQHEDVCVFELINIKDGVLDVHIFRKQS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0428 197 PANTHER B3 DOMAIN-CONTAINING 109 195 - -
Pvu7g0428 197 PANTHER B3 DOMAIN-CONTAINING 2 75 - -
Pvu7g0428 197 Gene3D - 1 78 IPR015300 -
Pvu7g0428 197 Gene3D - 99 197 IPR015300 -
Pvu7g0428 197 SMART B3_2 1 77 IPR003340 GO:0003677
Pvu7g0428 197 SMART B3_2 108 196 IPR003340 GO:0003677
Pvu7g0428 197 ProSiteProfiles B3 DNA-binding domain profile. 121 196 IPR003340 GO:0003677
Pvu7g0428 197 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 75 - -
Pvu7g0428 197 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 109 195 - -
Pvu7g0428 197 CDD B3_DNA 110 194 IPR003340 GO:0003677
Pvu7g0428 197 SUPERFAMILY DNA-binding pseudobarrel domain 110 195 IPR015300 -
Pvu7g0428 197 Pfam B3 DNA binding domain 1 75 IPR003340 GO:0003677
Pvu7g0428 197 Pfam B3 DNA binding domain 119 196 IPR003340 GO:0003677
Pvu7g0428 197 ProSiteProfiles B3 DNA-binding domain profile. 1 77 IPR003340 GO:0003677
Pvu7g0428 197 CDD B3_DNA 1 75 IPR003340 GO:0003677
Pvu7g0428 197 SUPERFAMILY DNA-binding pseudobarrel domain 1 77 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0428 2 78 REM Transcription Factor Family AT1G49480 30.864 4.60e-06 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pvu7g0428 B3 1.5e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0428 - - pvu:PHAVU_007G0419000 407.142