Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0424 ATGATGATCAAAGAAGATGAAACAATCTTATCAACAGCCAAAGAACAACCAGGTGAAAGGATGAACAGAGACAAAGACAACTATGGAAGCGAACATGACAACCCCAAAGAGTGGTTGAACCTGAACATAGGAGGCACTTCACTCTCAACTGCTGCAGACCCTGATTTACAATCAAGACCAGCCACTGCAAAAGTTTTTTCATGCAACTTCTGCAAGAGGAAGTTCTTCAGTTCACAGGCATTAGGAGGTCATCAAAACGCCCACAAGAGGGAAAGGGGAGCTGCCAGAAGGTACCAATCACAGAGGTCAATGACAATAATGGGCTTCTCCGTGAACACACCAACTATTCTTCGATCACTCGGTGTACAGCCCCATTCACTCGTGCATAAGCCATGCAGAGGTGGTACTGTGCTGGCACCCAGCTTTCATGATGCACATGCAAGGCTTGGGATGGCTTGGGCACCTTTCTCGTCAGAGGATCAAACAGATCTGGTATGGCCAGGTAGCTTTCGCTTGGTTGCACAACAACCCCAGCCACCACAGGAGCCACTCAACATTGATTTAGACCTCAGACTCTGA 579 0.4767 MMIKEDETILSTAKEQPGERMNRDKDNYGSEHDNPKEWLNLNIGGTSLSTAADPDLQSRPATAKVFSCNFCKRKFFSSQALGGHQNAHKRERGAARRYQSQRSMTIMGFSVNTPTILRSLGVQPHSLVHKPCRGGTVLAPSFHDAHARLGMAWAPFSSEDQTDLVWPGSFRLVAQQPQPPQEPLNIDLDLRL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0424 192 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Pvu7g0424 192 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 192 - -
Pvu7g0424 192 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Pvu7g0424 192 Gene3D Classic Zinc Finger 54 110 - -
Pvu7g0424 192 MobiDBLite consensus disorder prediction 1 33 - -
Pvu7g0424 192 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Pvu7g0424 192 MobiDBLite consensus disorder prediction 1 34 - -
Pvu7g0424 192 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0424 Pvu-Chr7 3338047 3340034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0424 61 180 C2H2 Transcription Factor Family AT1G24625 43.902 1.85e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0424 - - gmx:100306296 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0424 7 3338047 3340034 Pvu7g0424 7 3338047 3340034 ECH