Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0392 ATGGCAATTCAGCAACACAATCACCAACTACAGCATAATGAGAATGTCTCATCTGTTCTTGATGCCCTTTACTGTGATGAAGCAAAGTGGGAAGAAGAGGATGAGGACAGTGATGTCACAACAAACAATGATGCATGTGGGGTGCACGTGCACCACTCTGCCGGAGCTTCTCTCTTCCCTCTGCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGACGAGGAACTAAGCTCTCTCTTTTCCAAAGAGAAGCTTCAACATGAACAAGTTTATGGCTGTAACAATCTCAACAGTGATAGTAATGATAATAACAATCATGTGCATTTGAACCCTTGTTTCTCTCAGCCTCGTCGTGAGGCAGTGGAATGGATGCTTAAAGTCAATGCTCACTATGGATTCTCTGCTCTCACTGCAACACTGGCCGTTACTTACCTGGATAGGTTCCTTCTAAGCTTCCATTTTCAAAGGGAGAAGCCTTGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCTGCTAAAGTTGAAGAAACTCAAGTGCCCCTTCTCTTGGACCTTCAAGTGCAAGACACTAAGTATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTGCTGGTGCTGTCCACCCTCAAATGGAAGATGCATCCCGTGACCCCACTCTCGTTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACTCATCTTCACTGGGAGTTTCTCAGGCACTGTGAGCATCTTCTTCTGTCTGTGCTTTTAGATTCGAGATTTGTTGGGTGCCTTCCCTCTGTTTTGGCCACTGCAACAATGCTGCATGTTATAGACCAGATTGAACACAGTGGTGGGATGGAATACAAAAATCAGCTTCTGAGTGTTCTCAAAATTAGCAAGGAGAAAGTAGATGAGTGTTATAATGCTATTCTCCAACGCTCAAACGCCAATAATTATGGTCTTAACAACAACATTTACAAACGCAAGTATGAGGAAATTCCAGATAGCCCAAGTGGCGTAATTGATGCTGCATTTGGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTCACCACCAGAGCCTCTGTTCAAGAAGAGCAGAACCCAAGGACAACAAATGAAATTGTCACCACTTAATCGGGTCATTGTCGGAATTGTTGGCACCTCTCCTTGA 1182 0.4433 MAIQQHNHQLQHNENVSSVLDALYCDEAKWEEEDEDSDVTTNNDACGVHVHHSAGASLFPLLLLEQDLFWEDEELSSLFSKEKLQHEQVYGCNNLNSDSNDNNNHVHLNPCFSQPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRHCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEHSGGMEYKNQLLSVLKISKEKVDECYNAILQRSNANNYGLNNNIYKRKYEEIPDSPSGVIDAAFGSDGSNDSWAVGSSLYSPPEPLFKKSRTQGQQMKLSPLNRVIVGIVGTSP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0392 393 PANTHER CYCLINS 42 369 IPR039361 -
Pvu7g0392 393 SMART Cyclin_C_2 218 334 IPR004367 -
Pvu7g0392 393 CDD CYCLIN 116 208 IPR013763 -
Pvu7g0392 393 SMART cyclin_7 121 209 IPR013763 -
Pvu7g0392 393 Gene3D - 114 216 - -
Pvu7g0392 393 ProSitePatterns Cyclins signature. 116 147 IPR006671 -
Pvu7g0392 393 Pfam Cyclin, C-terminal domain 218 328 IPR004367 -
Pvu7g0392 393 Gene3D - 217 308 - -
Pvu7g0392 393 SUPERFAMILY Cyclin-like 110 216 IPR036915 -
Pvu7g0392 393 PANTHER CYCLIN D3.1 PROTEIN 42 369 - -
Pvu7g0392 393 Pfam Cyclin, N-terminal domain 114 215 IPR006671 -
Pvu7g0392 393 SUPERFAMILY Cyclin-like 219 328 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0392 Pvu-Chr7 3071377 3073726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0392 1 327 Core Cell Cycle Gene Families AT4G34160 53.823 5.12e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0392 K14505 - gmx:547740 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0392 7 3071377 3073726 Pvu7g0392 7 3071377 3073726 ECH
Pvu9g0696 9 11553719 11555872 Pvu7g0392 7 3071377 3073726 ECH
Pvu1g0254 1 2226702 2228463 Pvu7g0392 7 3071377 3073726 ECH
Pvu2g0157 2 1724756 1726646 Pvu7g0392 7 3071377 3073726 PCT