Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0391 ATGGATTCAGTGCCTGCTGATGTGTCTGATTCACATCTTATCAAAGATCCACCCACTTCTTCTCCTGCTAAAGAGAGTGATGCTGGTTTAGTTTCTGAGCAAGATAATTCAGCACGTGAGACACCTTCTGTGCTGTCCCCACCTGGCATATCGTCTTGGGCCAAAAGCTTGAAAATTTCTCAGTCATTTTCTGGCTCCCAAGATGACTCATCAAGTGGAAATGTTGGGAAATCAACTTTTGCTCGCTTCACTAGTAATCTGGGATTGAGGATGTCTCCAAAGTCTCCTGTAGCAGATGAAAGTTCCAATGAAACTGCTGTACAATCTAATTTGTTTGGAAGCATTACGAAAGGGCTGGTTGACACTTCTAAGAATGCTGTGAAAGCTGTGCAGGTTAAGGCACGCCATGTTGTTTCCCAGAATAAACGCAGATACCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACTGAAAACATCATTGCAATGGGATTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGCTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTGATCAAGTTTTTTGAAACTCAGCATAAGGATAAATACAAGGTTTATAATCTTTGTTCTGAGCGGTTGTATGATGCATCACTGTTTGAGGGAAAGGTGGCCAGCTTCCCTTTTGATGACCACAATTGCCCACCAATTCAACTGATTATATCATTCTGTCAAAGTGCTTACTCATGGTTGAAACAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCCAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACCGCTGAGGAATCGATGGATTACTATAATCAGAAAAGATGTGTTGATGGAAAGGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGAGTCTTAACTTACTTCAATGGCGAAAACCCTCCTGCCCGCAGGTGCATGCTTAGGGGATTCCGGCTTCACAGATGCCCTTACTGGATTAGGCCCTCTGTAACTATCTCAGATCATAGTGGTGTGTTGTTCTCAACCAAAAAGCATCCGAGAACCAAGGAGCTTTTGCCAGAAGATTTTTGGTTTAGTGCACCAAAGAAGGGAGTGATGGTGTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAGTTGGCTGGGGACTTCAAAATTCAATTTCATGATCGCCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACAGAAAATAGAAAAGTATTGAACACCGGTGATCTTGATGGCTTTGACAAGAGAAAATTACCTTCTCCGGGATTTGTGGTTGAGATTGTGCTCGCGGACTATAATGGCAATGTTGTAAGTTCGCAACCTGAAACTACTACAACAAAATCAGATGAGAGTTCAAGTAACAGTCCTGCTGGTCCTGCGCCAGTGGAAAGGAGCACACCTGCAGAGAATGCGGCCAAAGAATCAGAGTCTCATAATAATGATAAAGATGATGTGTTTTCAGATGGCGAGGCAGAGCAATCTGCTTCTTCAAAAACCAAGCAAACAAAAGTACCTTCTGAAGCAGTTGAAACAGTTAAAAATGATACCAGAGGGTCCGACTCCAACAGAATTTCAAATCAAATTGCAAATTTATCGCATGCAACAGAACAAGTTTCCTTGGGAAACAAGAACTCCTCCACGTCAATTCATCACGCTAGTGAGCCAAGAAGTAATGTTGACGGAAAAACAGTGTCCAGTATCGAGGTGCCCAGCGCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCTTCTGTTTTTACCTTTGGAGATGACGAAGACTACGAAAGTGATTGA 1866 0.4239 MDSVPADVSDSHLIKDPPTSSPAKESDAGLVSEQDNSARETPSVLSPPGISSWAKSLKISQSFSGSQDDSSSGNVGKSTFARFTSNLGLRMSPKSPVADESSNETAVQSNLFGSITKGLVDTSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETQHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSVTISDHSGVLFSTKKHPRTKELLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIQFHDRQGDFYCWLNTTMTENRKVLNTGDLDGFDKRKLPSPGFVVEIVLADYNGNVVSSQPETTTTKSDESSSNSPAGPAPVERSTPAENAAKESESHNNDKDDVFSDGEAEQSASSKTKQTKVPSEAVETVKNDTRGSDSNRISNQIANLSHATEQVSLGNKNSSTSIHHASEPRSNVDGKTVSSIEVPSAESEFKAMAADASVFTFGDDEDYESD* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0391 621 MobiDBLite consensus disorder prediction 493 513 - -
Pvu7g0391 621 CDD PTP_PTEN 153 317 IPR045101 GO:0016791
Pvu7g0391 621 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 17 621 - -
Pvu7g0391 621 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 236 296 IPR000387 GO:0016311|GO:0016791
Pvu7g0391 621 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 399 454 IPR035892 -
Pvu7g0391 621 ProSiteProfiles C2 tensin-type domain profile. 329 456 IPR014020 -
Pvu7g0391 621 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 156 324 IPR029021 -
Pvu7g0391 621 MobiDBLite consensus disorder prediction 514 533 - -
Pvu7g0391 621 MobiDBLite consensus disorder prediction 542 588 - -
Pvu7g0391 621 ProSitePatterns Tyrosine specific protein phosphatases active site. 259 269 IPR016130 GO:0016311|GO:0016791
Pvu7g0391 621 ProSiteProfiles Phosphatase tensin-type domain profile. 143 322 IPR029023 -
Pvu7g0391 621 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 17 621 - -
Pvu7g0391 621 MobiDBLite consensus disorder prediction 462 484 - -
Pvu7g0391 621 MobiDBLite consensus disorder prediction 1 51 - -
Pvu7g0391 621 Gene3D Protein tyrosine phosphatase superfamily 128 325 IPR029021 -
Pvu7g0391 621 MobiDBLite consensus disorder prediction 25 51 - -
Pvu7g0391 621 MobiDBLite consensus disorder prediction 462 588 - -
Pvu7g0391 621 SMART PTEN_C2_2 327 455 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0391 Pvu-Chr7 3059897 3067899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0391 35 621 Protein tyrosine phosphatase (PTP) family AT3G19420 68.739 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0391 K01110 - gmx:100784003 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0391 7 3059897 3067899 Pvu7g0391 7 3059897 3067899 ECH
Pvu2g0159 2 1734683 1744328 Pvu7g0391 7 3059897 3067899 PCT