LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g0384	ATGCTAGGTTCATTACCTATATTGCCTCTCCCTGCCCCTCCTGCTGATGGAAATCTAGGTCCTCTCCCTGAGTCTCAAGTATCCGAGGAGAGGACTTATAATGAGGAGCAGAACAAATCAAATTCAGCTTCTGTTCCAGTGCCCGCAACAGTTGCAACCCACACAAGAACTATTGGAATTATACATCCTCCTCCAGATATTAGGACCATTGTTGATAAAACGTCCCAGTTTGTGGCTAAAAATGGTCCAGAATTTGAAAAGAGGATTATTGCAAATAACACGGGCAATGTCAAGTTCAATTTTCTTAACTCATCAGATCCCTATCATGCATATTATCAACATCGGTTGGCTGAATTTCGTGCTCAGAATCAATCATCAGGGCAGCAAACTCCTTCCCAGTCCACTGACTCGGGTGTTCCTGAGTCAGCTCCAACTGCCCCTGTCCCGGATAGTAATGGCATAGCAGCAGTAGAAAAGTTCGATGTTTCTGCCCAGTTTAAACCTGTTAGGAAAGTACTTGAACCCCCTGAAGCAGAACAGTATACTGTTCGGCTTCCTGAAGGAATTACAGGTGAAGAGCTGGATATTATAAAGCTTACAGCACAATTTGTGGCTCGAAATGGGAAATCTTTTTTGACAGGGTTGACAAGTAGGGAAGTTAATAATCCCCAGTTCCACTTTTTGAAACCTACCCACAGCATGTTTACGTTTTTTACTTCTCTTGCGGATGCATATTCGAAGGTTTTGATGCCACCAAAGGGATTGACAGAGAAGCTGACGAAGAGTGTGTCTGATATGACTACTGTCCTTGAAAGGTGTGTGAATAGGCTGGAATGGGAGCGCTCGCAAGAGCAAGCTAGGCAAAAGGCTGAGGATGAGATAGAACAGGAAAGAATACAAATGGCTATGATTGATTGGCATGATTTTGTGGTGGTTGAAACAATAGATTTTGTTGATGAGGAGGATGAAGAATTACCACCTCCAATGACTATTGAGGTGGTTATCAGGAGAAGCAAGGCGTCAGCCACGGAAGATGATACTGTTGAGCCCGAAAAGGAGGTTGAAATGGAAATGGACGAGGAAGAGGCTCTGCTTGTTGAAGAGGGCATGAGAGCTGCTAGTTTGGAAGACTCAGATGATGGGAAGCAAAATGAAGTTAGAGTTACTGAAGACCCTGAACCACCAATGAGAATTGTTAAGAACTGGAAGAGACCCGAGGAGAGGATTCCTGCTGAAAGAGATTCAGCTAAGTTCGTTGTTTCTCCTATCACCGGTGAGCTAATTCCTATTAGCGAAATGTCAGAACATATGCGAATTTCTCTCATTGATCCCAAGTACAAAGAACAAAAAGAAAGGATGTTTGCCAAAATTCGAGAGACAACTTTGGCTGCGGATGATGAAATTTCAAGAAACATAGTTGGTCTTGCCCGGACCCGTCCTGATATTTTTGGTACCACAGAAGAAGAGGTCTCCAATGCTGTCAAGGCAGAGATTGAGAAGATAAATGATGAGCAACCTAAGCAGGTTATATGGGATGGTCACACAGGTAGTATTGGGCGTACTGCAAACCAAGCCATGTCACAGAATATTGGAAACGAGGACCAAAATGATACATCTAATAATGAGGCCAAGAACCTTCTTGGTCCTGCTGCACCTCCTCCAAGACCTGGTATGCCTTCAGTTCGTCCACTCCCGCCACCACCTGGATTGGCTTTAAATCTTCCACGTGGTCCAGTCCAATATTCTGTTCCTCATAGTGGTGGCCTTCCAATTCCTCCACCCAGGCCACTTTCGATGATGCCATCTGTTCGGCCTGCTCCTCCTCCTCCAATGCAGATGAATTCTGGACAGCAGTCAGTTATGGGTGGTCAACCGCACCCAATGCCTCCAATGCATATGAATAACCAAGGATTTCAAATACCTCCACCACCAGGATCCCAGTTCACTCCTGTTCCAGTTCCTCGACCTTATGTTCCTCTTCCTGTTCCACAATCAGTTATGCCTATGATGCACCCACCACCTTTGCCTCAGGGAGTGCCACCACCGCCGCCGCCAGAAGAGGCTCCTCCCCCACTCCCAGAAGAACCAGAACCAAAGAGGCAGAAACTTGATGATTATGCTCTGATCCCTGAAGATCAATTTCTGGCTCAACATCCTGGACCTGTTCGTATCAGTGTATCTGTTCCTAATGTTGATGAAGGAAGTCTCAAGGGACAAGTTCTGGAAATTACAGTGCAATCTTTGTCTGAAACCGTTGGTAGTTTGAAAGAAAAAATTGCAGGGGAGATTCAGCTCCCTGCTAATAAGCAGAAATTGAGCGGAAAACCTGGCTTTCTCAAGGATAACATGTCACTTGCCCATTACAATCTTGGTGGAGGGGAAACACTTACCCTCACCTTAAGAGAGCGGGGTGGTAGAAAGAGATGA	2427	0.4536	MLGSLPILPLPAPPADGNLGPLPESQVSEERTYNEEQNKSNSASVPVPATVATHTRTIGIIHPPPDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLAEFRAQNQSSGQQTPSQSTDSGVPESAPTAPVPDSNGIAAVEKFDVSAQFKPVRKVLEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNPQFHFLKPTHSMFTFFTSLADAYSKVLMPPKGLTEKLTKSVSDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVVETIDFVDEEDEELPPPMTIEVVIRRSKASATEDDTVEPEKEVEMEMDEEEALLVEEGMRAASLEDSDDGKQNEVRVTEDPEPPMRIVKNWKRPEERIPAERDSAKFVVSPITGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAADDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKINDEQPKQVIWDGHTGSIGRTANQAMSQNIGNEDQNDTSNNEAKNLLGPAAPPPRPGMPSVRPLPPPPGLALNLPRGPVQYSVPHSGGLPIPPPRPLSMMPSVRPAPPPPMQMNSGQQSVMGGQPHPMPPMHMNNQGFQIPPPPGSQFTPVPVPRPYVPLPVPQSVMPMMHPPPLPQGVPPPPPPEEAPPPLPEEPEPKRQKLDDYALIPEDQFLAQHPGPVRISVSVPNVDEGSLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAHYNLGGGETLTLTLRERGGRKR*	809

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g0384	808	MobiDBLite	consensus disorder prediction	669	691	-	-
	Pvu7g0384	808	ProSiteProfiles	SURP motif repeat profile.	196	238	IPR000061	GO:0003723\|GO:0006396
	Pvu7g0384	808	SMART	ubq_7	729	801	IPR000626	GO:0005515
	Pvu7g0384	808	MobiDBLite	consensus disorder prediction	587	608	-	-
	Pvu7g0384	808	SUPERFAMILY	Surp module (SWAP domain)	43	123	IPR035967	GO:0003723\|GO:0006396
	Pvu7g0384	808	SUPERFAMILY	Ubiquitin-like	701	806	IPR029071	-
	Pvu7g0384	808	MobiDBLite	consensus disorder prediction	1	48	-	-
	Pvu7g0384	808	Pfam	Surp module	68	119	IPR000061	GO:0003723\|GO:0006396
	Pvu7g0384	808	Pfam	Surp module	194	245	IPR000061	GO:0003723\|GO:0006396
	Pvu7g0384	808	MobiDBLite	consensus disorder prediction	530	564	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g0384	735	805	Cytoplasmic Ribosomal Protein Gene Family	AT3G62250	36.620	6.59e-06	45.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g0384	K12825		-	gmx:100797261	1207.59

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