LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g0327	ATGTTCCCTTTTGTTTTGTTGTTTTACTTTTTCCTTCTTTGCTGCAACTCTATTGCACCCTTGGTGCATTCTCTGAATGCTGAAGGCTCTGTACTTTTGACACTGAAGCAGTCGCTCACAGACCCACAAGGGTCCATGAGTAACTGGAATTTCTCTGATGAAAACCCTTGTTCATGGAATGGGATCACTTGCAAGGACCAAAATGTTGTGGCCATCAGCATCCCGAAGAGGAAACTCTACGGCTCTCTCCCTTCTTCACTGGGATCTCTCTCCCAGCTCCGCCATGTCAACTTCAGGAACAACAAGCTTTTTGGAAACTTGCCTGCACAGCTCTTTCAAGCTCAGGGACTGCAAAGCTTAGTGCTTTATGGCAATTCATTTTCTGGGTCTGTGTCTAGTGAGATTCAGAATCTCAGGTACCTTCAAACTCTAGATTTATCACAAAATTTCTTTAATGGGTCATTGCCTGCTGCAATTGTCCAGTGCAAGAGACTCAAGGCCCTTGTTCTCAGTCAGAACAATTTCACTGGCCCCTTACCAGATGGGCTTGGTACTGGTTTGTTTTCTCTGGAAAGACTAGACCTTTCTTTCAATCACTTCAATGGGTCAATTCCCAGTGATTTGGGAAATCTGTCAAGCCTGCAAGGAACTGTTGACTTGTCTCATAATCATTTTACTGGTTCAATTCCAGCTAGCCTTGGTAATCTGCCTGAGAAGGTTTACATTGATCTTACTTTCAACAATTTAAATGGTCCAATTCCTCAAAATGGTGCTTTGATGAACAGAGGACCAACTGCCTTTATTGGCAATCCTGGTCTATGTGGTCCTCCTCTGAAGAATTCATGTGGTTCTGATACTCCATCTGCGAGTTCACCTTCCTCGTTTCCATTTATTCCAAGTAACTACCCAGCTGAGGGTACTGGTAATGGTTCCATGGGAAGTGGGAAAAATAAAGGGCTAAGTAAGGGAGCTGTGGTTAGCATTGTTGTGGGTGATATAATTGGAATTTGCCTCTTAGGTTTGCTGTTCTCTTTTTGCTACTCAAGGGTTTGTGGTTTTAACCAGGATCTTGATGAAGATGGAGTTAACAAGGGAAGCAAAGGGAGGAAAGAGTGTTTCTGCTTCAGAAAGGATGAATCCGAGGCCCTGTCGGATAATAATGTTGAGCAATATGATCTTGTCCCATTAGATTCCCATGTGACTTTTGATTTGGATGAGCTTCTGAAGGCTTCAGCTTTTGTTCTGGGTAAGAGTGGAATAGGGATTATGTACAAAGTGGTGCTTGAAGATGGGCTAGCTTTGGCTGTGAGGAGGCTGGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTTCAAACAGAGGTAGAAGCAATAGGGAAGTTAAGACATCCAAATATTGCAACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATATCCAACGGAAGCCTTGATACAGCAATTCATGGGAAGGCTGGACTTCTCACATTTGCACCATTTTCTTGGTCCTATCGATTGAAGATCATGAAAGGAACAGCAAGAGGGTTGGTCTATCTGCATGAATTTAGCCCCAAAAAATATGTCCATGGAGACCTCAAGCCAAGTAACATACTTCTTGGACACGACATGGAACCCCACATTTCTGACTTTGGAGTTGGGCGCCTTGCAAACATTGCTGGTGGGTCTCCAACCTTGCAATCCAACCGAGTGGCTGCGGAGAAACAACATGGAAGACAAAAGAGCATCTCCACTGAAGTGACCACCAATGTGTTGGGGAACGGTTATATGGCTCCAGAAGCACTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTACTCATATGGTGTGATATTGTTGGAAATGATCACAGGAAAATCATCCATTGTCCAAGTGGGGAACTCAGAAATGGACCTTGTTCAGTGGATTCAGTTCTGCATTGAGGAAAAGAAGCCTCTCTTGGAGGTGTTGGATCCTTACTTGGCTGAAGATGCAGATAAGGAGGAGGAGATTATTGGAGTTTTGAAGATTGCAATGGCTTGTGTCCATAGCAGCCCCGAAAAGAGACCAACGATGAGGCACGTGCTTGATGCTTTGGATAGATTGACTATTTCCTCTGATTGA	2142	0.4388	MFPFVLLFYFFLLCCNSIAPLVHSLNAEGSVLLTLKQSLTDPQGSMSNWNFSDENPCSWNGITCKDQNVVAISIPKRKLYGSLPSSLGSLSQLRHVNFRNNKLFGNLPAQLFQAQGLQSLVLYGNSFSGSVSSEIQNLRYLQTLDLSQNFFNGSLPAAIVQCKRLKALVLSQNNFTGPLPDGLGTGLFSLERLDLSFNHFNGSIPSDLGNLSSLQGTVDLSHNHFTGSIPASLGNLPEKVYIDLTFNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNSCGSDTPSASSPSSFPFIPSNYPAEGTGNGSMGSGKNKGLSKGAVVSIVVGDIIGICLLGLLFSFCYSRVCGFNQDLDEDGVNKGSKGRKECFCFRKDESEALSDNNVEQYDLVPLDSHVTFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYISNGSLDTAIHGKAGLLTFAPFSWSYRLKIMKGTARGLVYLHEFSPKKYVHGDLKPSNILLGHDMEPHISDFGVGRLANIAGGSPTLQSNRVAAEKQHGRQKSISTEVTTNVLGNGYMAPEALKVVKPSQKWDVYSYGVILLEMITGKSSIVQVGNSEMDLVQWIQFCIEEKKPLLEVLDPYLAEDADKEEEIIGVLKIAMACVHSSPEKRPTMRHVLDALDRLTISSD*	714

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g0327	713	PANTHER	RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1	8	712	-	-
	Pvu7g0327	713	SMART	LRR_typ_2	90	114	IPR003591	-
	Pvu7g0327	713	SMART	LRR_typ_2	187	211	IPR003591	-
	Pvu7g0327	713	SMART	LRR_typ_2	138	162	IPR003591	-
	Pvu7g0327	713	SMART	serkin_6	414	709	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0327	713	Gene3D	Ribonuclease Inhibitor	77	290	IPR032675	-
	Pvu7g0327	713	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	533	545	IPR008271	GO:0004672\|GO:0006468
	Pvu7g0327	713	Gene3D	Phosphorylase Kinase; domain 1	377	484	-	-
	Pvu7g0327	713	Pfam	Protein kinase domain	415	703	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu7g0327	713	CDD	STKc_IRAK	415	708	-	-
	Pvu7g0327	713	Pfam	Leucine rich repeat N-terminal domain	26	64	IPR013210	-
	Pvu7g0327	713	SUPERFAMILY	L domain-like	27	278	-	-
	Pvu7g0327	713	Gene3D	Transferase(Phosphotransferase) domain 1	485	712	-	-
	Pvu7g0327	713	SUPERFAMILY	Protein kinase-like (PK-like)	414	705	IPR011009	-
	Pvu7g0327	713	Pfam	Leucine rich repeat	140	200	IPR001611	GO:0005515
	Pvu7g0327	713	Gene3D	Ribonuclease Inhibitor	19	76	IPR032675	-
	Pvu7g0327	713	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	8	712	-	-
	Pvu7g0327	713	ProSiteProfiles	Protein kinase domain profile.	409	708	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g0327	Pvu-Chr7	2505655	2508361	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g0327	7	713	Receptor kinase-like Gene Family	AT2G01210	67.827	0.0	983

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Pvu7g0327		Pkinase	6.3e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g0327	-		-	gmx:100792873	1226.08