Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0316 ATGAGTCGGGTTCATCAATTTGTATCACTGCTTTTGTTTTCTAAGTTTCTGGCACTTCTCTTTGCGGCTGGGGACCAAGGAACGTGTCCACCTTCTTTTCATTGTGGATATCTTGGCAATCTCACTTTCCCTTTTACTACAACTGAACGCCAAGACTGTGGCTTCTTGTCCATACGAAATTGTGATGATCATGATCCAAAAAAGTTCAAATTTATCCAATTACCACCAAATGGAAAGTTGTTTCAAGTTATAGGCATAGCGCAGCTTTTGAGTAGCCCTACTACTCATTTCTCAACTTTGCAATTTAGAGACAAACATTTCTATGACCTTCTGCAGAAGAAAAGTTGTGAAGCTTTCAGAAACAATTATACTCTTCCTCATATTTCTGACTTTGCTGCTTTTACATTGGTACACACCACAACTCTATTCTTGTGCAACCACACCCTCCATGTCAACCCTCCCACAAATATAAATATGAGCAAGTATAAGTGCGATGACTACGATATCTACTACAAGCTCTTCATGGAAGATGACGATAAGCCTTCTTTCACAGCATGTAAAGAGGTCCAGCTTCCAATTAAAGACGTGCCTGACGCCAGTGACCCATTTTCTTTCCTAACTGGGGATGTCAATAGTAAAGTGGAATTAACAGATAATTGTTCAGATTGCTACTATCGCCAAGGAGGGCAGTGTCAACTTGACAGCAGAGAAATTTTTTGTTGTGGCAATGTTCCGAAACAAGGGTTGCGTGGGAATGCCAGACTGGCTTTAGGTTTAGGTATTGGAATCCCATGCATGATGCTAATTGGATTATTGTTTTTCTTTCTACGCTACAAACGAAAACATGCTACCTCAGGTGGACATATGGAGTCAAAAGATTCTTATTCTGATTCATCCTCGATTCTTGATCAGGCAAGTAGTGGCGAATACTTTGGAGTTCCACTCTTCTCTTACGCGCAGCTTAAAGAAGTCACGAACAATTTCGACCATACTCAGGAACTTGGAGATGGAGGCTTCGGCACTGTCTACTACGGGAAACTCCCAGATGGAAGGGAAGTTGCGGTGAAACGGTTATACGAGCACAACTGGAGGCGAGTAGAACAGTTCATGAACGAAGTTAAGATCCTCACACGTTTGCGTCACAAGAATCTCGTGTCACTCTACGGCTGCACTTCTCGGCACAGCCGTGAACTCCTCCTTGTGTACGAATACATTTCAAACGGCACCGTAGCATGTCATCTCCACGGTGGATTAGCCAAGCCTGGCTTGCTACCATGGCCTACACGTATGAAAATTGCCATAGAAACTGCCAGTGCATTGGCCTATCTCCACGCCTCAGACATCATCCACCGTGACGTGAAAACAAACAACATTCTCCTGGACAACAACTTCGGTGTCAAGGTAGCAGATTTTGGTCTTTCAAGAGATTTCCCGAACGATGCCACACATGTCTCCACAGCCCCACAAGGGTCCCCGGGTTACCTTGACCCTGAATATTACAGCCGGTACCAGCTCACTAGCAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCCAAGCCTGCTGTTGATTTGAACAGGAGCAGGGACGAGATTAACTTGTCAAATCTAGCAGTAAGGAAGATTCAAGAATGTGCAATTGGTGAACTTGTAGATCCTTGCCTTGGGTTTGATTCGGACAGTGGGGTTAAAGGGATGATAATATCAGTGGCAGGGTTGGCTTTACAGTGTTTGCAAGGGGAAACGGAGTTGAGACCTTCGATGGATGAGGTGTTGCATGAACTGCAGAGAATTAAGAGTGGGAAGGATGAGATAGATGTTGATAATGTTGGAGTTTCAGATGCACCAGCAGCAGTCTCACCCGAGTGGGATGAAGTTGGACTTTTGAAGAATATGAAGAAGCCTACTTCCCCAGACACTGTCACTGATAAATGGGAAAGTAAATGTACTACACCTAATGCAAGTGGCTAA 1986 0.4396 MSRVHQFVSLLLFSKFLALLFAAGDQGTCPPSFHCGYLGNLTFPFTTTERQDCGFLSIRNCDDHDPKKFKFIQLPPNGKLFQVIGIAQLLSSPTTHFSTLQFRDKHFYDLLQKKSCEAFRNNYTLPHISDFAAFTLVHTTTLFLCNHTLHVNPPTNINMSKYKCDDYDIYYKLFMEDDDKPSFTACKEVQLPIKDVPDASDPFSFLTGDVNSKVELTDNCSDCYYRQGGQCQLDSREIFCCGNVPKQGLRGNARLALGLGIGIPCMMLIGLLFFFLRYKRKHATSGGHMESKDSYSDSSSILDQASSGEYFGVPLFSYAQLKEVTNNFDHTQELGDGGFGTVYYGKLPDGREVAVKRLYEHNWRRVEQFMNEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKPGLLPWPTRMKIAIETASALAYLHASDIIHRDVKTNNILLDNNFGVKVADFGLSRDFPNDATHVSTAPQGSPGYLDPEYYSRYQLTSKSDVYSFGVVLIELISSKPAVDLNRSRDEINLSNLAVRKIQECAIGELVDPCLGFDSDSGVKGMIISVAGLALQCLQGETELRPSMDEVLHELQRIKSGKDEIDVDNVGVSDAPAAVSPEWDEVGLLKNMKKPTSPDTVTDKWESKCTTPNASG* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0316 661 Gene3D Phosphorylase Kinase; domain 1 302 404 - -
Pvu7g0316 661 MobiDBLite consensus disorder prediction 634 661 - -
Pvu7g0316 661 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 20 660 - -
Pvu7g0316 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 660 IPR044652 -
Pvu7g0316 661 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Pvu7g0316 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pvu7g0316 661 CDD STKc_IRAK 334 603 - -
Pvu7g0316 661 MobiDBLite consensus disorder prediction 640 661 - -
Pvu7g0316 661 SUPERFAMILY Protein kinase-like (PK-like) 309 600 IPR011009 -
Pvu7g0316 661 Pfam Protein tyrosine and serine/threonine kinase 331 530 IPR001245 GO:0004672|GO:0006468
Pvu7g0316 661 Gene3D Transferase(Phosphotransferase) domain 1 405 619 - -
Pvu7g0316 661 SMART serkin_6 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0316 661 ProSiteProfiles Protein kinase domain profile. 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0316 Pvu-Chr7 2405094 2409239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0316 33 661 Receptor kinase-like Gene Family AT1G25390 46.468 9.19e-174 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu7g0316 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0316 - - vra:106771857 956.051