Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0311 AACACTCGTGCTGATTCCTTCCAAAATCCAGACACGGAGAGTGACAGGATCTTCTTTGGGGTACCCGTCTTCTCTTATAAGGAACTTCAAGATGCAACCAACAATTTTGACCCCACTAGAAAGCTCGGAGATGGAGGCTTTGGCATTGTTTACTACGGGACTCTGAGAGATGGAAGGGAAGTTGCAATCAAACATTTATTTGAGCACAACTACAAGAGAGTGGAACAGTTTATGAATGAAATTGAGATCCTTACTCGCTTGCGCCACAGAAATCTTGTGTCCCTTTATGGCTGCACTTCACGTCATGACCACGAGCTATTGCTTGTGTATGAATACATTCCAAATGGCACAGTTGCCAGCCATCTCCATGGTGAATTAGCAAGAGTTGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCCGTAGACACTGCTACTGCATTGTCCTATCTCCATGCTTCTAACATCATTCACCGTGATGTGAAAACCAATAACGTTCTGCTTGACATTAATTTTTCCGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCCAATGATGTAAGCCACGTTTCCACAGCTCCACAAGGGTCTCCGGGGTATCTTGATCCTGAATATTTTCAATGCTATAGGCTCACTGATAAGAGTGATGTGTACAGCTTTGGGGTTGTGCTGATGGAGCTAATATCATCCATGCCAGCAGTTGATGCAGCCAGGGAAAGGGATGAAGTTAACTTAGCAAATCTTTGCATGAAAAAGATTCAAAAAGGAAAGCTTGGTGAGCTTGTAGACCCCTCCTTTGGGTTTGAGTCAGACCAAGTGGTTAAAAGGATGGTGACTTCAGTGGCAGAATTGGCCTTTCGGTGTGTGCAAGGAGACAATGAATTAAGGCCTTCTATGGACCAAGTTCTGGAAGCCCTCAAGAAAATCCAAAGTGGGAATTATGAGTATGAGAATCTAGAGAAAGGAGATGATGGTGGTAATGTTATTCCTTCTACATCCCAAGAAGAAGTGCAACCACCACCATCGGCGTCACGGAATTCGAGTCAAATTGGAATTTTAATGAATAATAAGCTATCTTCGCAAAAGTCCTTCTCTGAGAAATGGGAAAGTGAATCCACCACGCCCAATGTCAGTGGTTAA 1146 0.4354 NTRADSFQNPDTESDRIFFGVPVFSYKELQDATNNFDPTRKLGDGGFGIVYYGTLRDGREVAIKHLFEHNYKRVEQFMNEIEILTRLRHRNLVSLYGCTSRHDHELLLVYEYIPNGTVASHLHGELARVGLLTWPIRMQIAVDTATALSYLHASNIIHRDVKTNNVLLDINFSVKVADFGLSRLLPNDVSHVSTAPQGSPGYLDPEYFQCYRLTDKSDVYSFGVVLMELISSMPAVDAARERDEVNLANLCMKKIQKGKLGELVDPSFGFESDQVVKRMVTSVAELAFRCVQGDNELRPSMDQVLEALKKIQSGNYEYENLEKGDDGGNVIPSTSQEEVQPPPSASRNSSQIGILMNNKLSSQKSFSEKWESESTTPNVSG* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0311 381 MobiDBLite consensus disorder prediction 362 381 - -
Pvu7g0311 381 MobiDBLite consensus disorder prediction 329 354 - -
Pvu7g0311 381 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 6 380 - -
Pvu7g0311 381 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 380 IPR044652 -
Pvu7g0311 381 ProSiteProfiles Protein kinase domain profile. 36 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0311 381 SMART serkin_6 36 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0311 381 CDD STKc_IRAK 42 311 - -
Pvu7g0311 381 Gene3D Phosphorylase Kinase; domain 1 8 112 - -
Pvu7g0311 381 Gene3D Transferase(Phosphotransferase) domain 1 113 323 - -
Pvu7g0311 381 Pfam Protein tyrosine and serine/threonine kinase 39 308 IPR001245 GO:0004672|GO:0006468
Pvu7g0311 381 MobiDBLite consensus disorder prediction 321 354 - -
Pvu7g0311 381 SUPERFAMILY Protein kinase-like (PK-like) 19 311 IPR011009 -
Pvu7g0311 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Pvu7g0311 381 ProSitePatterns Protein kinases ATP-binding region signature. 42 64 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0311 Pvu-Chr7 2381596 2382841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0311 11 381 Receptor kinase-like Gene Family AT1G25390 58.995 1.03e-155 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu7g0311 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0311 - - gmx:100789176 637.491