Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0304 ATGGCTGCACTTCATGTGTCAGGAGTGGTTTTGTTCGGATGGCTTTTACAAGTGGTATTGGGTGGTGGTAACTGTCCCTCCTTGATTAACTGCGGCGATCTCGGTAACATAAGTTTTCCTTTCACCGACACACGTCACCGAGACTGCGGCATATTGGTGATACACGGCTGTGATGACCACGAACCAGGGGCCCAAAAAACCATAAAAAACAACAACAAATGGTTTGATATTCTGAAGCTGGAGCAGTTGACGATTACCATCAAAGACGATGAACTCCGCGACTTTTTGCTGCAGCGAAGTTGTGACACCTTCAACCACAACTACACTTTCACTGTCAGCTCGCCTTTGGCTAAGATTTCTCGTTTAAATCATTACGTAGACGTACTCAGATGTAACCGCGCCCTCGGTGCTCCGCCAAACAATTCAGTTTCTAACTCTGCAATTTGCAAAAATGAAACACTGTATTCAATGGTTGACACCGATTCTTCTTCCAGCTACAGTCATCTCAAAGGATGTTCAGTGGTTGAGCTTCCAACGAGCTCCGACATGGTGTTTGCGGATCTTGATCCCGATGACCCTTTCAAGCTCGTAACTTACGAAATCAGCATTGGAATAGAATTGTCTCAGAACTGTTTTAGGTGTCTGTATGCTAATGGCGGCCAATGTCGAGTTGACAACACCGGAATGTTCTACTGTGACCAAGGAAATAAATCAACAAAAATTCGTCTTATAGTGACAACAGTTGCATGTGTGGGTGGAACACTAGGAGTTCTGATATTTCTGGGGTGGTTCATTAGAAGACGGTTTTACAAGAAAAACCCCACCTACGAAATCATTGAGATGTTTCTGAACACCCACGGTCATCTTGCAGCCAAAAGATACAGTTATTCAGAGATAAAGAAGGCCACAAACTCCTTCAGAAACAAATTGGGTGAAGGAGGGTACGGTAGCGTGTACAAGGGCAAGTTAAACGATGGAAGCCTTGTGGCAGTGAAAGTATTAAGCGAGTCCAAAGGTAACGGTGAGGAGTTCATCAATGAAGTTGCTAGCATCAGTCTTACTTCTCATGTTAACATTGTTAGTTTACTAGGATTCTGTCAGGAAGGTTCTAAAAGAGCTTTAATATACAAGTACATGCCTAATGGATCCCTTGAGAAGTTCATATATGAAGACAAGGATCCACGCAAGCTTAATCTTCAATTAAGCTGCAAAACCATCTACAGCACTGCAATTGGCATTGCTCGAGGATTAGAGTATTTACACAGAGGATGCAATACCAAAATCTTGCATTTTGATATAAAGCCTCACAATATACTGATTGATGAGGATTTCTGCCCCAAAATTTCAGACTTTGGACTGGCTAAAATATGTCAGAAAAAGGAAAGTATTGTGTCCTTATTGGGAACTAGGGGAACTGCAGGATACATTGCTCCCGAGGTGTTCTCTAGAAATTTTGGAGAAGTCTCTCATAAATCTGATGTATATAGCTATGGAATGGTGGTTTTGGAAATGGTGGGGGGAAAGATGAATAATAATGTTGATGTTGAAGGTTCAAGCGAAATATATTTTCCAAACTGGGTTTACAAGCGTCTTGAGCTGAATGAGGAGCCTAGACTGCGAAGCATAAAAAGTGAAAGTGATAGAGAAATGATACGAAAGTTGATTATTGTGAGCTTATGGTGCATTCAGACAGACCCATCAAATAGGCCAGCAATGACTAGAGTGGTAGATATGATGGAAGGAAGCTTGGAGGTCTTGCAAATACCACCAAAACCTTATCTATCTTCACCTCCCAGATCACCTCCTAGCTCCTCAGATCACACCACCTACACCTCTCACACTACTTATCCTTCTGAATACTGA 1863 0.423 MAALHVSGVVLFGWLLQVVLGGGNCPSLINCGDLGNISFPFTDTRHRDCGILVIHGCDDHEPGAQKTIKNNNKWFDILKLEQLTITIKDDELRDFLLQRSCDTFNHNYTFTVSSPLAKISRLNHYVDVLRCNRALGAPPNNSVSNSAICKNETLYSMVDTDSSSSYSHLKGCSVVELPTSSDMVFADLDPDDPFKLVTYEISIGIELSQNCFRCLYANGGQCRVDNTGMFYCDQGNKSTKIRLIVTTVACVGGTLGVLIFLGWFIRRRFYKKNPTYEIIEMFLNTHGHLAAKRYSYSEIKKATNSFRNKLGEGGYGSVYKGKLNDGSLVAVKVLSESKGNGEEFINEVASISLTSHVNIVSLLGFCQEGSKRALIYKYMPNGSLEKFIYEDKDPRKLNLQLSCKTIYSTAIGIARGLEYLHRGCNTKILHFDIKPHNILIDEDFCPKISDFGLAKICQKKESIVSLLGTRGTAGYIAPEVFSRNFGEVSHKSDVYSYGMVVLEMVGGKMNNNVDVEGSSEIYFPNWVYKRLELNEEPRLRSIKSESDREMIRKLIIVSLWCIQTDPSNRPAMTRVVDMMEGSLEVLQIPPKPYLSSPPRSPPSSSDHTTYTSHTTYPSEY* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0304 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 31 619 IPR045874 GO:0004672
Pvu7g0304 620 Gene3D Phosphorylase Kinase; domain 1 282 378 - -
Pvu7g0304 620 SMART serkin_6 304 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0304 620 Gene3D Transferase(Phosphotransferase) domain 1 379 587 - -
Pvu7g0304 620 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 31 619 - -
Pvu7g0304 620 Pfam Protein kinase domain 308 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0304 620 ProSiteProfiles Protein kinase domain profile. 304 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0304 620 MobiDBLite consensus disorder prediction 589 620 - -
Pvu7g0304 620 MobiDBLite consensus disorder prediction 600 620 - -
Pvu7g0304 620 SUPERFAMILY Protein kinase-like (PK-like) 285 579 IPR011009 -
Pvu7g0304 620 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Pvu7g0304 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0304 Pvu-Chr7 2346238 2349448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0304 24 611 Receptor kinase-like Gene Family AT5G38260 39.297 4.97e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu7g0304 Pkinase 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0304 - - vun:114191483 1043.49