Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0281 ATGTTTCTGAATCCTTTTCTAATTCCGTCTGTCATTTCCCAAGTCTCAACCAAACCAGACGAAGCTAGGAGACCAGAAGGAAACCCGTTAGATCTTAACAATTTGCCCGATGAGTACTCTAGAGATGGCAAACAAGTCCTTGAAGACCATACCTCTTCAACCGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTTAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACGGAGACACTGAACCAGGCTCGTCAACTGGTATTTCGTAGTGATCATAGCCTTGCTGCACAAGCTCCCCCTCACTTAGGATGCTGCCAACCGATAGGAAGCGGTGGTTATCACCCAACAGGAGATCCAACGGCACCACTAAGATTCCCGAGGTACTTCTCAGGTTCATCCTCAACTCACATGCCGCCAGCAGCACCGGCACCGGTAGCACCACAGCCATACCTGTATACCTCACCTACAAGGCCAGTGTCATTTGGGTCATCACACTTCCCTCACCAGCATGCGGTGAATGATTACTATGTGGGTCATGTGATGAGTGGGAGTCACGGACACTATGTGGGAGGAGGAGGAGGAGGAGGAGAGAGCACAAGCAGTTACACATGCATTGGTGCACCGGTGGGACAAGGTGGCGGTGCTCCTGCTGTTAAGGACGGGTCACTGCATAATAATCAGGAGGAAGGGTTGAGTTGGGGAAGGGGCTATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA 834 0.5108 MFLNPFLIPSVISQVSTKPDEARRPEGNPLDLNNLPDEYSRDGKQVLEDHTSSTGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRSDHSLAAQAPPHLGCCQPIGSGGYHPTGDPTAPLRFPRYFSGSSSTHMPPAAPAPVAPQPYLYTSPTRPVSFGSSHFPHQHAVNDYYVGHVMSGSHGHYVGGGGGGGESTSSYTCIGAPVGQGGGAPAVKDGSLHNNQEEGLSWGRGYRLDPPSAINRFQDGF* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0281 277 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Pvu7g0281 277 PANTHER ZINC FINGER PROTEIN JAGGED 24 246 IPR045320 GO:0003700
Pvu7g0281 277 MobiDBLite consensus disorder prediction 37 67 - -
Pvu7g0281 277 MobiDBLite consensus disorder prediction 15 67 - -
Pvu7g0281 277 SUPERFAMILY beta-beta-alpha zinc fingers 66 120 IPR036236 -
Pvu7g0281 277 PANTHER ZINC FINGER PROTEIN JAGGED 24 246 IPR031113 GO:0007275
Pvu7g0281 277 Gene3D Classic Zinc Finger 50 126 - -
Pvu7g0281 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0281 Pvu-Chr7 2105082 2107328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0281 23 237 C2H2 Transcription Factor Family AT1G13400 42.661 3.91e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0281 - - aprc:113871902 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0281 7 2105082 2107328 Pvu7g0281 7 2105082 2107328 ECH