Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0254 ATGGCTGCGAAGGAAGATAATCGAATATTTGTGGGTGGTTTATCTTGGGACGTCACGGAGCGTCAACTCGAGCATGCCTTTGCTCGTTACGGCAAAATTCTCGAATGCCAGATCATGATGGAAAGGGATACAGGCCGTCCTCGTGGATTTGGGTTTATCACATTTTCAGACCGTAGGGGAATGGAGGATGCAATCAAGGAAATGCATGGACGGGAAATTGGTGATCGCATCATCTCTGTCAACAAGGCGCAGCCTAAGATGGGGGGTGATGATGTAGACCAAGGTTACAGAGGCAGCTACTCATCAGGTGGTAGGGGAAGCTATGGTGCTGGAGATAGGGTAGGACCTGCC 351 0.5014 MAAKEDNRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFSDRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDVDQGYRGSYSSGGRGSYGAGDRVGPA 117
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0254 117 MobiDBLite consensus disorder prediction 80 117 - -
Pvu7g0254 117 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE 1 113 - -
Pvu7g0254 117 SUPERFAMILY RNA-binding domain, RBD 4 111 IPR035979 GO:0003676
Pvu7g0254 117 PANTHER TRANSFORMER-2-RELATED 1 113 - -
Pvu7g0254 117 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Pvu7g0254 117 Gene3D - 1 115 IPR012677 -
Pvu7g0254 117 SMART rrm1_1 8 81 IPR000504 GO:0003723
Pvu7g0254 117 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu7g0254 Pvu-Chr7 1829877 1834223 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0254 9 88 C2H2 Transcription Factor Family AT2G19380 43.750 1.80e-17 75.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0254 - - pvu:PHAVU_007G025100g 219.55
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0254 7 1829877 1834223 Pvu7g0254 7 1829877 1834223 ECH