Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu7g0254 | ATGGCTGCGAAGGAAGATAATCGAATATTTGTGGGTGGTTTATCTTGGGACGTCACGGAGCGTCAACTCGAGCATGCCTTTGCTCGTTACGGCAAAATTCTCGAATGCCAGATCATGATGGAAAGGGATACAGGCCGTCCTCGTGGATTTGGGTTTATCACATTTTCAGACCGTAGGGGAATGGAGGATGCAATCAAGGAAATGCATGGACGGGAAATTGGTGATCGCATCATCTCTGTCAACAAGGCGCAGCCTAAGATGGGGGGTGATGATGTAGACCAAGGTTACAGAGGCAGCTACTCATCAGGTGGTAGGGGAAGCTATGGTGCTGGAGATAGGGTAGGACCTGCC | 351 | 0.5014 | MAAKEDNRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITFSDRRGMEDAIKEMHGREIGDRIISVNKAQPKMGGDDVDQGYRGSYSSGGRGSYGAGDRVGPA | 117 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu7g0254 | 117 | MobiDBLite | consensus disorder prediction | 80 | 117 | - | - | |
Pvu7g0254 | 117 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE | 1 | 113 | - | - | |
Pvu7g0254 | 117 | SUPERFAMILY | RNA-binding domain, RBD | 4 | 111 | IPR035979 | GO:0003676 | |
Pvu7g0254 | 117 | PANTHER | TRANSFORMER-2-RELATED | 1 | 113 | - | - | |
Pvu7g0254 | 117 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 9 | 78 | IPR000504 | GO:0003723 | |
Pvu7g0254 | 117 | Gene3D | - | 1 | 115 | IPR012677 | - | |
Pvu7g0254 | 117 | SMART | rrm1_1 | 8 | 81 | IPR000504 | GO:0003723 | |
Pvu7g0254 | 117 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 7 | 85 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu7g0254 | Pvu-Chr7 | 1829877 | 1834223 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu7g0254 | 9 | 88 | C2H2 Transcription Factor Family | AT2G19380 | 43.750 | 1.80e-17 | 75.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu7g0254 | - | - | pvu:PHAVU_007G025100g | 219.55 |