Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0231 ATGGGATCCAAAATTCTTCCGCAATGGGCATCCAAGCCTTGCGCCATGGGAATCGACGAGGCTGGAAGAGGCCCTGTTTTAGGACCCATGGTTTATGGTTGCTTATACTGTGCTCAGTCTTATATGAAAACCCTAGCCACATTGAGTTTTGCAGATTCTAAGACACTGAAGGAAGAGAAGAGGGAAGAGTTGTTTGAAACTTTAAAGACCAATGAGTCTATTGGATGGGCTGTAGATGTCATTGACCCTCGGGAACTATCCGCTAAAATGCTTAAGAAGAATAAGATAAACTTGAATGAGATTTCACATGACTCTGCCATGGGTCTCGTTGATAGGGTACTAAAAATGGGAGTGCTTCTAACTGAGGTGTATATAGATACAGTTGGAGATCCAGGGAAGTATGAAATGAAGCTGTCTAAAAATTTTCCATCCATCAAATTTGTGGTTGCAAAGAAGGCTGATAGCCTTTACCCCGTTGTTAGTGGTGCAAGCATAGTTGCTAAGGTCACAAGGGACCGTGCTTTAAGAGAATGGGTACTTGATGAGACTGCTGAAAACATGCAGAGGAACTTTGGCTCTGGATATCCTGGAGACCCCAAAACCAAGGATTGGCTAGAGGATCACAAACATCATATCTTTGGATTTCCAACATTGGTTCGATTTAGTTGGGGAACCTGCAACTCTTATTTTAAAGATGTAGCACAAGTGTTATGGGAGTCTGACAATTTGGATGAAGATGGCGGTGGTGGAAGTAATAGTAATGGCAAGCGACAATTGAAATTAAGCAATGTGGGTTTTTTCTCCACATCCAAGAGGAGAAGTGAAGAAGTAGAATCAAGTGGTAAAGGACGCTGTAGGTTTTTTCAGGCTCGTAAACTTGAGCACCTCACTAATTTCTAA 900 0.4222 MGSKILPQWASKPCAMGIDEAGRGPVLGPMVYGCLYCAQSYMKTLATLSFADSKTLKEEKREELFETLKTNESIGWAVDVIDPRELSAKMLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEMKLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMQRNFGSGYPGDPKTKDWLEDHKHHIFGFPTLVRFSWGTCNSYFKDVAQVLWESDNLDEDGGGGSNSNGKRQLKLSNVGFFSTSKRRSEEVESSGKGRCRFFQARKLEHLTNF* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0231 299 Pfam Ribonuclease HII 16 226 IPR024567 GO:0004523
Pvu7g0231 299 SUPERFAMILY Ribonuclease H-like 14 231 IPR012337 -
Pvu7g0231 299 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Pvu7g0231 299 PANTHER RIBONUCLEASE 5 298 - -
Pvu7g0231 299 TIGRFAM TIGR00729: ribonuclease HII 16 227 IPR004649 GO:0004523|GO:0016070
Pvu7g0231 299 PANTHER RIBONUCLEASE H2 SUBUNIT A 5 298 IPR001352 GO:0003723|GO:0004523
Pvu7g0231 299 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 13 235 IPR024567 GO:0004523
Pvu7g0231 299 Gene3D - 1 185 IPR036397 GO:0003676
Pvu7g0231 299 CDD RNase_HII_eukaryota_like 16 232 - -
Pvu7g0231 299 Gene3D Ribonuclease hii. Domain 2 186 234 IPR023160 GO:0004523
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0231 5 299 Core DNA Replication Machinery Family AT2G25100 66.102 5.57e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0231 K10743 - gmx:100779875 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0231 7 1572240 1575466 Pvu7g0231 7 1572240 1575466 ECH