Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0201 ATGGGTAGTTGTGGAAGAGAAGGAGCTGTGAGGCAATATATAAGGTCAAAGGTTCCTCGCTTAAGGTGGACTCCCGAGCTGCACCGTTGCTTTGTTCACGCCATTGAGAGCCTTGGAGGTCATCAAAAGGCTACTCCGAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGTCATCTTCAGATGTACAGAAGCATGAGGGGCGACTTGGGTAGACAAGGTAGGACACCCTCCCAACATAGGAACCAATCTTTTGAGGAGCACGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTGTTGAGTACTCATGTTCGAAACCCATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGCAATCTCCCTCCAAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGCCTGCAATGCAGCCTAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGAACCCCATGGCTGAGCACAAGGGAATAAAGGAGTTCTGCAAGGCTTCAACTTGGCAGATACAACCCCATTCCTCTCTGTTACCACACTTTCCCAACCTCACTTCATTCCAAAGTCCTAACCAAAACTCAGATTTCCTCCAGGTCACAACATTAAATGAAGGAAAGAGCAGTGGAAAGGGAATTAATGTAGATGTGAACACTGAGACAGGTGAGGCAGAAGTTGAGGATGTAGGAGGGTATGAATTGTCATTGTCGCTTACAATGGCAAATCCTTCACCTCAGAGAAGTAATGGTTCATGTTCAGGCAGTGAGATCAGTGAGACAATCTCATCATACCCTGCTGCAGGGTTTAGCAACTACAAGGACTGCACTAGTTCATCCACTCTCAAAGAAACAATTAATTTGGACCTTTCTTTGGCCTTATGTGGCAATTGA 936 0.453 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIESLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTPSQHRNQSFEEHDDGCVDEVNDVGVEYSCSKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSLRLCDAVPNPYCFYDYLQNPMAEHKGIKEFCKASTWQIQPHSSLLPHFPNLTSFQSPNQNSDFLQVTTLNEGKSSGKGINVDVNTETGEAEVEDVGGYELSLSLTMANPSPQRSNGSCSGSEISETISSYPAAGFSNYKDCTSSSTLKETINLDLSLALCGN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0201 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Pvu7g0201 311 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Pvu7g0201 311 Gene3D - 18 74 - -
Pvu7g0201 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Pvu7g0201 311 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Pvu7g0201 311 MobiDBLite consensus disorder prediction 76 96 - -
Pvu7g0201 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 311 IPR044848 GO:0003700
Pvu7g0201 311 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0201 Pvu-Chr7 1364714 1368877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0201 1 74 G2-like Transcription Factor Family AT1G14600 73.418 4.06e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu7g0201 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0201 - - gmx:100787188 455.677