Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0192 AAAAAAAATATTTTGCAGGAAACAATGGGGACCCAGGTTTTGATTTCAGCACCAGGTGGACTAGTTGAGCTGTTTGTAACCAAACAAGTGCATGAAGACCATGAAGTGATAGATTTTGTGACAAACCAGTGCATTGAAGCGGTGAACCACTCAATGAGCTACATTGAGAACTTGCAACCAAACCCACTTTTGGGCGATGAAAACGAAGGAAACAATAGCAGGAACACTCACTTCCACCCTTCAGAACATGTGATCACCATGTGCAGTTCTCCACTGAACTTGATGCAGCAGTTCAACTACAACCAGCAGAACAGAGTGAAGAGCGATGGGTTTTCTGAAGAGTCTTTGGAGGCAAAAGAGAAGCAGCAGCAGGAGGAGGAGAAGGAGCTGGTGAAGGGTCGATCAGATTCAATGTCGGATTGCAGTGAGCAGAACGAGGAAGAGGAAGAGGGAAAGTACAGGAGGAGGAATGGGAAAGGGAACCAGTCCAAGAACCTCATGGCTGAGAGGAAGAGGAGGAAGAAGCTGAATGACAGGTTATACAAGCTTCGTTCTTTGGTTCCAAGGATCTCTAAGTTGGATAGGGCCTCTATCCTTGGAGATGCCATTGAATATGTTAAGGATTTGCAGAAGCAAGTGAAGGAGCTTCAAGATGAGCTTGAGGAGAATGCAGACACTGAAAGCAACTGCATCAATGGGAATAATGATAACAATAATAATCAATATGTGGGTGTTGGTGAACTGTGTCCAAATCATGAACATGCTAAGTCCCAATCTGGGTTGCATGTGGGCACATCAGGGAATGGCTATGTGTCCAAACAAAAGCAGGAAGATGCAGCTCTCATTGACAAGCAAACCCAGCAGATGGAGCCGCAAGTGGAAGTGGCTCTGATAGATGGGAATGAGTATTTTGTGAAGGTATTCTGTGAACACAGGCCTGGTGGGTTTGTGAGATTGATGGAGTCCTTCAACACCATTGGCATGGATGTAGTGCATGCCACGGTAACAAGCCACAAGGGTCTCGTTTCAAATGTTTTTGAAGTGGAGAAAAAGGACAGTGAAAGTGTTGAAGCTGAAGATGTAAGAGAGTCGCTGCTGGAGCTTACGAGGAACCGTTACAGAGGATGGAGCCATGAGGTGACAGCAAATTCTGAGAATGGTGTGGGAAGGGATCAACACCAGATAGCTGCATATCCCCACCATTTTCATACTTAA 1215 0.4551 KKNILQETMGTQVLISAPGGLVELFVTKQVHEDHEVIDFVTNQCIEAVNHSMSYIENLQPNPLLGDENEGNNSRNTHFHPSEHVITMCSSPLNLMQQFNYNQQNRVKSDGFSEESLEAKEKQQQEEEKELVKGRSDSMSDCSEQNEEEEEGKYRRRNGKGNQSKNLMAERKRRKKLNDRLYKLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQDELEENADTESNCINGNNDNNNNQYVGVGELCPNHEHAKSQSGLHVGTSGNGYVSKQKQEDAALIDKQTQQMEPQVEVALIDGNEYFVKVFCEHRPGGFVRLMESFNTIGMDVVHATVTSHKGLVSNVFEVEKKDSESVEAEDVRESLLELTRNRYRGWSHEVTANSENGVGRDQHQIAAYPHHFHT* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0192 404 MobiDBLite consensus disorder prediction 110 157 - -
Pvu7g0192 404 ProSiteProfiles ACT domain profile. 304 376 IPR002912 -
Pvu7g0192 404 Coils Coil 199 229 - -
Pvu7g0192 404 SMART finulus 166 215 IPR011598 GO:0046983
Pvu7g0192 404 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 7 378 - -
Pvu7g0192 404 Gene3D - 147 225 IPR036638 GO:0046983
Pvu7g0192 404 CDD bHLH_AtAMS_like 163 228 - -
Pvu7g0192 404 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 222 IPR036638 GO:0046983
Pvu7g0192 404 MobiDBLite consensus disorder prediction 109 171 - -
Pvu7g0192 404 Coils Coil 116 136 - -
Pvu7g0192 404 CDD ACT_UUR-ACR-like 305 368 - -
Pvu7g0192 404 Pfam Helix-loop-helix DNA-binding domain 165 210 IPR011598 GO:0046983
Pvu7g0192 404 PANTHER TRANSCRIPTION FACTOR ABORTED MICROSPORES 7 378 - -
Pvu7g0192 404 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 209 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0192 Pvu-Chr7 1302339 1304539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0192 3 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 43.972 9.29e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g0192 HLH 1.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0192 - - gmx:100798282 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0192 7 1302339 1304539 Pvu7g0192 7 1302339 1304539 ECH