Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0168 ATGCAATCTATCAGGAAGTCCTTCAAATCTTATGGTTCGTTCAAACAGTCAAAAAGGTTTTCCGGCGCCGGAAACCACGATTCCGACCACGAGCAGCTGCCTATTCTCCTCGACCAAGAATCGCACCGCCACACCGCAATGCCCGCCGGCGACTACGTCGTCAAGATAGACGACGGCGCCAACCCCCCGCAGGGCAACAGGATTTGGCGCGAGTCCAGCTACGAGTTTTGGAAGGGCGAAAGCTCCTCCTCCGCCGCCGCCGCGAGCGACCAGAGTTTTGATTTTCGGCAGACGGAGGACCCGCCGTCGCAGCTGATAGGGCGGTTCCTCCACAAGCAGCGGGCCTCCGGCGAGATGCAGCTGGACATGGATTTGGAAATGGAGGAGCTCCAGCGCGACGCCGACGAGCGGAGGTTGACGCCGGTGGAGGAGTCTCCGGTGAACCTTCGCGTGTCCAGGGAGCTGAAGGTCTCCTTCGACGAACCCCTTTCCAATTCGACTCTCCTGGAACCGCAGACCGAGGCCTTCAGGAGAAGGCACAGCAAGGAATCTCCGACGATGACGGACTTCCAACGCCCTCCGCAGGTGCCGCAGTACGACCGTCGCCGCTCGCCCTCGCCGTCTCCCGTCAGCGACAGCGAGGTCCTTCGCTGCACCTCAAACGCCTCCTTCGAGAGAAACCTCTCCATGCAGAGAAAATCCGCGTTGTTGAAGGCCAAAACGAGATCCAGGTTGATGGACCCGCCAGAGGAACACGACAGAAGATCGGGGCGGGTCATGAAATCGGGTCAGCTCGTTTCCGGGTTTTTGGGAAAAAAGGGTGATGAGGAGGAAGACGACCCGTTTCTGGAAGAGGATATTCCTGATGAGTTTACCCAGACCCATTTCAGCTTCTGGATTCTTCTGGAGTGGGTGAGTTTGATTCTGATCATTGGGTTGTTGATAACCACCCTCTGCATTCCCCTTCTGAGGAGGAAGCATCTGTGGCAGCTCAAGTTGTGGAAATGGGAGGTTATGGTTCTGGTTTTGATCTGTGGGAGATTGGTGTCTGATTGGGTTGTTAGAATTGCTGTGTTCTTCATTGAGAGGAACTTCCTCTTGAGAAAAAGGGTGCTGTATTTTGTGTACGGTGTGAGGAAAGCGGTTCAGAATTGTGTTTGGTTGGGGCTGGTGTTGATTGCATGGCATTTGTTGTTTGATCAGAGGGTGCAGAGGGAGACCAACAGTGATATCCTTGAGTATGTTAACAAGGTGTTGGTGTGTTTCCTTGTGGGGACTCTGGTGTGGTTGCTCAAGACTCTCATGGTTAAGGTCTTGGCCTCTTCTTTCCATGTCAGTACCTACTTTGATAGGATTCAGGAGTCACTGTTCAATCAGTTTGTGATCGAGACGCTTTCGGGGCCTCCATTGGTGGAGATTCAGAGGGCTGAGGAGGAGGATGAGAGGCTTGCTGATGAGGTTCAGAAGCTGCAAAATGCTGGGGTTACCATACCCCCTGACCTCAGAGAAACTGCTTTTTCTAATATCAAGAGTGGGAGGATCAGGAGTGGAGTGCTCAAGAGCCCCAGAGGAAAGAGTGGCAAGTTTTCTCGGCCTCTTTCTAAGAGATCCGATGATGGTAATGTCATCACCATTGATAACCTGCATAAGCTCAACCCCAAGAATATCTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGCATGGGGCTTTGAGTACCTTGGATGAACAGATAATTGATAGCGCCAATGATGATGAGAATGCCACACAAATTAGAAGTGAAAACGAGGCAAAAGCTGCTGCTAAGAAAATATTTCACAATGTTGCTAGGCGTGGGTGCAGGTATATATACCCGGATGACTTGATGCGATTTATGCAAGAAGACGAAGCTGCAAAAACCATGAATCTCTTTGAAGGAGCATCTGATTCTGGGAGAATAGGCAAAGGAGCCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAAAGGAGAGCACTTGCTTTGACACTGAATGACACAAAAACGGCAGTGAACAAACTTCACAGAATGCTCAATTTTATAGTTGCAATTGTTGTACTGATTATTTGGCTCTTGATATTGGAACTTGCCACCACCAAATTTCTTGTCTTTTTGAGTTCCCAGGTTGTCTTGGTTACATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATAATTTTCCTATTTGTCATGCACCCATTTGACGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTGGTAGAAGAAATGAACATATTGACAACCATATTTCTGAAATTTGATAATCATAAGGTGATCATCCCCAACAGTGTCCTTGCCACCAAGGCTATATTTAACTACTACAGGAGTCCTGACATGTCAGATATTATCGAATTCTATGTACACATATGCACCCCAGTTGAAAAGATTTCACTCATTAAACACAGAATAAACAGTTTCTGTGAAAACAAGAAGGAGCACTGGTATCCTTCACCTATCATAGTAATCAGGGATTATGATCAATTAAACATGGTGAAAATGGCTATCTGGCCAAATCATAAAATGAACTTCCAAGATCAGGGAGAAAGGTATATAAGGAGATCCCTTTTGCTTGAAGAGTTGCTCAAGACTTTCAGGGAGCTGGACCTTAACTACCGTCTCCTTCCCATGGACATTAACGTGAGATCAGTGCCTACCTCTTCTGAAAGGCTTCCACCTAGTTGGTCAACAATTCAAGGTTGA 2754 0.4822 MQSIRKSFKSYGSFKQSKRFSGAGNHDSDHEQLPILLDQESHRHTAMPAGDYVVKIDDGANPPQGNRIWRESSYEFWKGESSSSAAAASDQSFDFRQTEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELQRDADERRLTPVEESPVNLRVSRELKVSFDEPLSNSTLLEPQTEAFRRRHSKESPTMTDFQRPPQVPQYDRRRSPSPSPVSDSEVLRCTSNASFERNLSMQRKSALLKAKTRSRLMDPPEEHDRRSGRVMKSGQLVSGFLGKKGDEEEDDPFLEEDIPDEFTQTHFSFWILLEWVSLILIIGLLITTLCIPLLRRKHLWQLKLWKWEVMVLVLICGRLVSDWVVRIAVFFIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDQRVQRETNSDILEYVNKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQRAEEEDERLADEVQKLQNAGVTIPPDLRETAFSNIKSGRIRSGVLKSPRGKSGKFSRPLSKRSDDGNVITIDNLHKLNPKNISAWNMKRLMNMVRHGALSTLDEQIIDSANDDENATQIRSENEAKAAAKKIFHNVARRGCRYIYPDDLMRFMQEDEAAKTMNLFEGASDSGRIGKGALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIVVLIIWLLILELATTKFLVFLSSQVVLVTFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLKFDNHKVIIPNSVLATKAIFNYYRSPDMSDIIEFYVHICTPVEKISLIKHRINSFCENKKEHWYPSPIIVIRDYDQLNMVKMAIWPNHKMNFQDQGERYIRRSLLLEELLKTFRELDLNYRLLPMDINVRSVPTSSERLPPSWSTIQG* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0168 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 148 914 - -
Pvu7g0168 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 138 - -
Pvu7g0168 917 MobiDBLite consensus disorder prediction 1 35 - -
Pvu7g0168 917 MobiDBLite consensus disorder prediction 243 258 - -
Pvu7g0168 917 MobiDBLite consensus disorder prediction 201 217 - -
Pvu7g0168 917 Gene3D - 742 791 IPR023408 -
Pvu7g0168 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 148 914 IPR016688 -
Pvu7g0168 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 138 IPR016688 -
Pvu7g0168 917 Coils Coil 473 493 - -
Pvu7g0168 917 MobiDBLite consensus disorder prediction 239 258 - -
Pvu7g0168 917 Pfam Mechanosensitive ion channel 684 839 IPR006685 GO:0016020|GO:0055085
Pvu7g0168 917 MobiDBLite consensus disorder prediction 1 21 - -
Pvu7g0168 917 SUPERFAMILY Sm-like ribonucleoproteins 732 791 IPR010920 -
Pvu7g0168 917 MobiDBLite consensus disorder prediction 166 217 - -
Pvu7g0168 917 PIRSF Memb_At2g17000 38 917 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0168 Pvu-Chr7 1123146 1127246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0168 51 914 Mechanosensitive Ion Channel Family AT1G78610 56.766 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0168 K22048 - gmx:102665658 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0168 7 1123146 1127246 Pvu7g0168 7 1123146 1127246 ECH