Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0165 ATGGCGCGCGAAAGTGACATGGGACAAGGGAACGCAGTCACCGTTCCCGTGGATTCAAACCCCACAGAGAAAAATAGTCAATCTTTGGATTTTAATGCTGTGTGTGAGGCTGATGAGACTAAAGCAATCGACTTCGCTGGAAAAGATGATGATGGGGCAGGAGGGTATTATTCTGTTGCAGAAGGTGTGAAAAGGAAGCGTGACAGAAAGAGTGAAGAGGAGGAGGGTATGGGAACGGTGTTGGAGGGCCATTTGTTGGAGGAGAACAATGGTCAAGACGGAGACCATGGTGAAAATGGTGGGGTTGGAGTTTCTTCTTCTGTTCAAGGCGTGAAAAAGAAGCGTGGCAGAAAGAGTAAAAAAGAGAAGGAAGAAATGGAGATGAAGTTGTCAGGGGGCAATTTGTTGGAGAAGAATGGTGTTGAATACGTTAGCCATGGTAAAAATGGTGGGGTAGGAGATTCTTCTGTTCAACGTGTGAAAAAGAAGCGTGGCAGAAAGAGTAAGAAAGAGAAGGAAGACATGGAATTGAAGATGTCAGGGGGCAATTTGTTGGAGAAGAAGGGTGGTTCTTCTTCTGTTCAAGAAGGTGTGAGAGAGAAGCCTGGGAGTAATGGCGGGGTTGCTTATAAGAGACGTGGGAGAAAAAGAAAGGTTGTTAAGGAAGATGACGACGAGTTTGAAACGCCTGCGTTTTTTTCAGGAAGTGGCAGTCAGAAACAATATAGTCTTAGAAGCCCTAAAGTCAAAATAGAAGTGGTGATGCCAAAAATCAACAAGAAGGATAGTAAGTTGACTGAAGAACAGTCCTCAATGTGCCATCAATGTCAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCACAAACTGTAATAGGAAAAGATTTTGCGTACCTTGTATACTAAATTGGTATCCTCATCTGGAAGAGGATTACTTTGCTGAGGCATGTCCTGTGTGTCGTGGTAATTGCAACTGCAAAGCATGCTTGAGATCTGATGTACTGATTAAAGAAATGAAGGAAAAAACAAAAACCAATAAAGATGAGAAGGTTGAACTCTCTACGTATTTGATGCAAGTACTTCTTCCGTATTTAAGATTGTTGGATGAAGAACAAATGGTTGAGAAAGAGACAGAAGCTAAGATACAGGGGATCGCAGTCTCAGAGCTAAATGTAGTACATGCAGATTATTCTATGACAGAGCGTGTATATTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGTACAAAATGCTCTTTCGATCTTTGTCTCATCTGTTGCCGTGAGCTTCGCAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATTATGTTGGAGTTTTCCTGGCAAGGTCGTGGTTACTTACATGGTGAAAAAGTAAATAAAAGGGTAAACCAAACTGAATCAAATGATGTTGCTAAGCCTGTAGTTCGTGAATGGTCAAGATCTGGATGGCATGCAGAAAGTAATGGTAGCATTCCTTGTCCAAAAGTCAGTGATGAATGTAACCATGGTTTTCTTGAACTGAGAAGTGTATTAGGTCAAAATTTTATCAGTGATTTATTGTGTAAAGCAAATGAACTAGCACAAACATATGAGCTTGGGACCCCCCCTGACAACTTCTGTTTGTGTTCAAGGCTTGATAGAAACACAGATGTTAGATATAATGGTATGAGGAAGGCTGCTTCCCGTGCAGATTCCAGTGACAACTATTTGTACTGTCCTAGGGCTGTACAACTACAAGAAGAGGATTTAGGGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTTAGCCATGTGATTGATTCTATGTCTGGCTTAAGCTGGGAACCCCTTGTCATGTGGCGTGCATTCCGTCAGATGACTAAGACCAAGCATGAACACCATTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGTGAAATTAATATTCATCAATTCTTTACTGGGTATACAAGAGCTCGTGAAGATTGGCTTAATTGGCCTCAGATATTGAAATTGAAAGACTGGCCACCTTCTAATTTATTTGAGGAACGCCTGCCTCGACATTGTGCTGAGTTCATATCTTCCTTGCCATTCAAGGAATATACTGATCCTCTTGGTGGTTCTCTTAACCTAGCTGTGAAATTGCCTAGAAAGTGTATAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGATTTCCTCAGGAGCTTGGACGTGGTGACTCGGTTACTAAGCTCCACTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTTAAATTGGAACCAAAGCATCTTACTGCCATTGAGAAGTTGAAACAAAAGCACTTTGAGCAAGACAAAAGGGAGCTACTTAGTGATGATCAGGATGGAGAAACTAATGTTGACATGCATGATAATATATCTTCTGCCATAAATTCCTTGGAGAAGCAAAATAGTGTCCAAGTTTTGGAAAACAAAAGTGGATGTTGTGATGAGAAAGAAGATCAGTTTCATCAACCCTCTGTTGGTAGTGAGGTTGCCATTGCTAGTGAGGATGGTATTTCATGTGGATCAGAGCTCAAAGAGGTTGACAAAGTAAATATGAAGCAAGAAAGTGATCTGTCGTTTGCAGGGGATGGTTCAGAAGGTGCTCTGTGGGATATTTTTCGGAGGCAGGATGTACCTAAATTGCAGGAGTATATGAGGAAGCATTTCAGAGAGTTTAGGCATATCCACTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGACCAGACCTTCTATTTGACCGTGGAGCATAAGAGGAAGCTTAAGGAGGAGTTCGGAATTGAGCCCTGGACATTCATTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATTAAGGTAGCATTGGATTTTGTTTCTCCTGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAGGAATTTCGTACACTTCCTATAAACCATGGGTCTGCTGAGGACAAATTGGAGGTGAAAAAGATGACAATATATGCTATGCAAGATGTGGTAACAAAATTGGAGAATGCAAGGTCTCAAGTAAATATTCCTGTAACAGACAAAGGGGAGGTGAAAGTGTGA 3147 0.4194 MARESDMGQGNAVTVPVDSNPTEKNSQSLDFNAVCEADETKAIDFAGKDDDGAGGYYSVAEGVKRKRDRKSEEEEGMGTVLEGHLLEENNGQDGDHGENGGVGVSSSVQGVKKKRGRKSKKEKEEMEMKLSGGNLLEKNGVEYVSHGKNGGVGDSSVQRVKKKRGRKSKKEKEDMELKMSGGNLLEKKGGSSSVQEGVREKPGSNGGVAYKRRGRKRKVVKEDDDEFETPAFFSGSGSQKQYSLRSPKVKIEVVMPKINKKDSKLTEEQSSMCHQCQRNDKGRVVRCTNCNRKRFCVPCILNWYPHLEEDYFAEACPVCRGNCNCKACLRSDVLIKEMKEKTKTNKDEKVELSTYLMQVLLPYLRLLDEEQMVEKETEAKIQGIAVSELNVVHADYSMTERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIMLEFSWQGRGYLHGEKVNKRVNQTESNDVAKPVVREWSRSGWHAESNGSIPCPKVSDECNHGFLELRSVLGQNFISDLLCKANELAQTYELGTPPDNFCLCSRLDRNTDVRYNGMRKAASRADSSDNYLYCPRAVQLQEEDLGHFQWHWEKGEPVIVSHVIDSMSGLSWEPLVMWRAFRQMTKTKHEHHLDVKAIDCLDWCEGEINIHQFFTGYTRAREDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLGGSLNLAVKLPRKCIKPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLEPKHLTAIEKLKQKHFEQDKRELLSDDQDGETNVDMHDNISSAINSLEKQNSVQVLENKSGCCDEKEDQFHQPSVGSEVAIASEDGISCGSELKEVDKVNMKQESDLSFAGDGSEGALWDIFRRQDVPKLQEYMRKHFREFRHIHCSPLKQVIHPIHDQTFYLTVEHKRKLKEEFGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHGSAEDKLEVKKMTIYAMQDVVTKLENARSQVNIPVTDKGEVKV* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0165 1048 MobiDBLite consensus disorder prediction 62 222 - -
Pvu7g0165 1048 SMART cupin_9 688 999 IPR003347 -
Pvu7g0165 1048 ProSiteProfiles Zinc finger RING-type profile. 273 320 IPR001841 -
Pvu7g0165 1048 SUPERFAMILY Clavaminate synthase-like 589 1024 - -
Pvu7g0165 1048 Pfam JmjC domain, hydroxylase 886 982 IPR003347 -
Pvu7g0165 1048 ProSiteProfiles JmjC domain profile. 707 999 IPR003347 -
Pvu7g0165 1048 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 76 1026 IPR045109 GO:0032454|GO:0033169
Pvu7g0165 1048 Gene3D Cupin 574 1007 - -
Pvu7g0165 1048 PANTHER - 76 1026 - -
Pvu7g0165 1048 MobiDBLite consensus disorder prediction 12 29 - -
Pvu7g0165 1048 MobiDBLite consensus disorder prediction 62 81 - -
Pvu7g0165 1048 MobiDBLite consensus disorder prediction 1 29 - -
Pvu7g0165 1048 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 268 333 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0165 Pvu-Chr7 1075726 1087685 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pvu7g0165 JmjC 1e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0165 K15601 - gmx:100805723 1460.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0165 7 1075726 1087685 Pvu7g0165 7 1075726 1087685 ECH