Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0153 ATGATGTCTTCCGGCGGGGACGGTGGGAAGCCATTTTTCTGCCACGTGTGCAATCAGAGGATCACGTGCACCGATGAGTCGGAACCGTTCTGCCCGATCTGTCTGGAAGGTTTCGTGGAAGAATGGAACCCTAACAACCATAGCCATAACCCTAATTTTGTCCATGAGAGTGGTGGAGAATCTTTGGATCCCGAATTTCCGTTCGATTTGATCGATTCCATGCTCCCTCTCTTGCTCAACTCCGGTTCCAGGACCCGCCGCGAAGCCGACATGTTCGACCCGAGGACCTACCTCCAGAACTACCTTCAGAGCCTTCGCGCTGACGGCGCCAACATTCAATTCTCCTTCGGCCACCCTTCCGACAACTGGTTTCGCTCCCCGGCCAACCTTGGCGACTACTACCTCGGCCCCGGCTTTGAGCAGTTGATTCAGCTCCTCGCCGACAACGATCCCAACCGTTACGGCACGCCGCCAGCCGCCAAGGACGCCATCGAGAATCTCCCCACAGTCACCGTCGACGACGAGTTGCTGAACTCGGAGATGAACCAATGCGCGGTCTGCCAGGACGAGTTCGAGAAGGACACGCAGGTGAAGCAGATGCCGTGCAGGCACGCTTACCACGCTGACTGCTTGATTCCTTGGCTCCGGCTGCATAACTCGTGCCCTGTGTGTCGGTATGAACTGCCCACCGATGACTCCGAATATGAGAATCGGCCACGGGCCAGTGGCGATGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGTCGAGGTCTGATGTGAGCGATAGTGGCAGTGGCAGTGGCGCGGGAGGGGGAAATAATAGAGCTGTTCACAGGACTGTTAGAATATTTTTGCGGCCTCCTTCTGATGGAGGTGACTCGGTGCAGGACAATGCCGAAAGGGGATGGGAAAGTTGGGATTGA 921 0.5689 MMSSGGDGGKPFFCHVCNQRITCTDESEPFCPICLEGFVEEWNPNNHSHNPNFVHESGGESLDPEFPFDLIDSMLPLLLNSGSRTRREADMFDPRTYLQNYLQSLRADGANIQFSFGHPSDNWFRSPANLGDYYLGPGFEQLIQLLADNDPNRYGTPPAAKDAIENLPTVTVDDELLNSEMNQCAVCQDEFEKDTQVKQMPCRHAYHADCLIPWLRLHNSCPVCRYELPTDDSEYENRPRASGDGGGGGGGGGGSRSDVSDSGSGSGAGGGNNRAVHRTVRIFLRPPSDGGDSVQDNAERGWESWD* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0153 306 ProSiteProfiles Zinc finger RING-type profile. 184 225 IPR001841 -
Pvu7g0153 306 Pfam Ring finger domain 182 225 IPR001841 -
Pvu7g0153 306 SMART ring_2 184 224 IPR001841 -
Pvu7g0153 306 PANTHER OS06G0101300 PROTEIN 9 290 - -
Pvu7g0153 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 231 IPR013083 -
Pvu7g0153 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 9 290 - -
Pvu7g0153 306 MobiDBLite consensus disorder prediction 229 306 - -
Pvu7g0153 306 SUPERFAMILY RING/U-box 163 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0153 Pvu-Chr7 1029895 1032338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0153 128 240 C3H Transcription Factor Family AT5G01980 46.018 4.80e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0153 K11982 - gmx:100785289 410.994