Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0125 ATGGATTTGGACCAGTGGATCTCGAAGGTCAAAGATGGCCAGCATCTTCTCGAAGACGAGCTTCAACTTCTCTGTGAATATGTAAAAGAGATCCTTATTGAAGAGTCCAATGTGCAGCCTGTCAATAGTCCGGTAACTGTTTGTGGTGATATTCATGGTCAATTCCATGATCTGATGAAACTTTTCGAAACTGGGGGTCATGTGCCGGAGACTAATTATATTTTTATGGGAGACTTTGTTGATCGAGGTTACAATAGTCTTGAGGTTTTCACCATTCTTTTACTTCTAAAAGCTAGATACCCAGCTAACATTACTCTTTTACGTGGAAATCATGAAAGTAGACAATTAACCCAGGTCTATGGATTTTATGATGAATGCCAGAGGAAGTACGGCAATGCCAATGCATGGCGGTATTGTACAGATGTGTTTGACTATCTAACACTTTCTGCAATTATTGATGGAACTGTGCTTTGTGTTCATGGTGGCCTTTCTCCTGACATTCGAACAATCGATCAGATAAGGGTCGTTGATCGGAACTGTGAAATTCCTCACGAGGGTCCTTTCTGTGATCTAATGTGGAGTGATCCTGAAGATATTGAGACATGGGCAGTCAGTCCCCGTGGTGCAGGTTGGCTATTTGGATCAAGGGTGACTTCTGAGTTCAATCACGTAAATAATCTCGATCTTGTTTGTCGAGCACATCAACTTGTTCAAGAAGGCCTCAAGTATATGTTCCAAGATAAAGGCCTTGTAACTGTATGGTCTGCACCTAATTACTGTTACCGATGTGGAAATGTAGCTTCTATTCTGAGTTTCAATGAAAATATGGAAAGAGAAGTTAAATTTTTCACTGAAACAGAGAACAATCAGATGAGAGGGCCCAGGACAGGCGTTCCATATTTCTTATAA 909 0.4092 MDLDQWISKVKDGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFETGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVVDRNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHVNNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETENNQMRGPRTGVPYFL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0125 302 ProSitePatterns Serine/threonine specific protein phosphatases signature. 107 112 IPR006186 GO:0016787
Pvu7g0125 302 SMART pp2a_7 16 287 IPR006186 GO:0016787
Pvu7g0125 302 Pfam Calcineurin-like phosphoesterase 44 235 IPR004843 GO:0016787
Pvu7g0125 302 Gene3D - 1 302 IPR029052 -
Pvu7g0125 302 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 302 - -
Pvu7g0125 302 PRINTS Serine/threonine phosphatase family signature 44 71 IPR006186 GO:0016787
Pvu7g0125 302 PRINTS Serine/threonine phosphatase family signature 73 100 IPR006186 GO:0016787
Pvu7g0125 302 PRINTS Serine/threonine phosphatase family signature 106 130 IPR006186 GO:0016787
Pvu7g0125 302 PRINTS Serine/threonine phosphatase family signature 141 167 IPR006186 GO:0016787
Pvu7g0125 302 PRINTS Serine/threonine phosphatase family signature 170 197 IPR006186 GO:0016787
Pvu7g0125 302 PRINTS Serine/threonine phosphatase family signature 226 246 IPR006186 GO:0016787
Pvu7g0125 302 PRINTS Serine/threonine phosphatase family signature 249 265 IPR006186 GO:0016787
Pvu7g0125 302 CDD MPP_PP2A_PP4_PP6 2 285 - -
Pvu7g0125 302 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 302 - -
Pvu7g0125 302 SUPERFAMILY Metallo-dependent phosphatases 2 286 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0125 Pvu-Chr7 851941 858541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0125 43 221 Calmodulin-binding Proteins AT5G63870 37.500 2.49e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0125 K15498 - gmx:100811943 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0125 7 851941 858541 Pvu7g0125 7 851941 858541 ECH