Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0117 ATGGTGAACGTGGTGGAGTTGCAGAATCAGCTGCAGAGGTGGCAGCAGAGTGGGAACAATAATGTCAATGTCGATGCCAACGGAGAACTCATGTATGTCCAAGTCATGACTGACGAACAGTTGGAAACTCTCAGGAAACAAATTGCTGTTTATGGTACCATCTGTGATCAACTCATTGAGATGCACAGAACACTCTCAGCCCAACAGGATCTTGCAGGGGTTAGATTGGGAAACCTGTACTGTGATCCATTGATGATATCTGGTGGACACAAAATAACATCGAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAGATTCTTGAACGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAGGAGATCACTACTGAACTGGGCCAGCATGGCCAAATTTCTGAAACAAATGTGTACAATTGGTTTCAGAATAGGCGTGCTCGATCCAAAAGAAAACTGCAAAACGTGGCTCCTACCAACACTGAATCAGAAGTGGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAAGCTGAGGAGTTTCAGTCCCAACATATCATAGGACCTGAAAAGCTGTGCTTTCAGAACCCTCAAGTCTACTCTGACTTGCAGTACTTGAATCCTGATTCCAGCAAACCATACTCCATCTTCCCATCAGATGACAGTTTGAAATCCACAAGAAATTTGACTCATGTGTCTGTTTTTAACCAGGTGCTGTCAAACTCAAGGAGTGAGTATGCAGGTGGAAAAATGGAAGTTGGTGGGACAGTGAGCTACAATTTGATCCACCAAACAGGAGACTGCAATCTGGGGGGTTGA 831 0.4404 MVNVVELQNQLQRWQQSGNNNVNVDANGELMYVQVMTDEQLETLRKQIAVYGTICDQLIEMHRTLSAQQDLAGVRLGNLYCDPLMISGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITTELGQHGQISETNVYNWFQNRRARSKRKLQNVAPTNTESEVDTEVDSKDKKTKAEEFQSQHIIGPEKLCFQNPQVYSDLQYLNPDSSKPYSIFPSDDSLKSTRNLTHVSVFNQVLSNSRSEYAGGKMEVGGTVSYNLIHQTGDCNLGG* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0117 276 PANTHER - 14 274 - -
Pvu7g0117 276 SMART HOX_1 93 160 IPR001356 GO:0003677
Pvu7g0117 276 ProSiteProfiles 'Homeobox' domain profile. 91 156 IPR001356 GO:0003677
Pvu7g0117 276 PANTHER WUSCHEL-RELATED HOMEOBOX 13 14 274 IPR044559 GO:0003700
Pvu7g0117 276 CDD homeodomain 95 156 IPR001356 GO:0003677
Pvu7g0117 276 Pfam Homeodomain 95 155 IPR001356 GO:0003677
Pvu7g0117 276 SUPERFAMILY Homeodomain-like 94 157 IPR009057 -
Pvu7g0117 276 Gene3D - 97 161 - -
Pvu7g0117 276 MobiDBLite consensus disorder prediction 154 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0117 Pvu-Chr7 806048 808906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0117 4 276 Wox Gene Family AT4G35550 48.845 4.04e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu7g0117 Homeodomain 1.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0117 - - pvu:PHAVU_007G011600g 560.451