Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0114 ATGATGAAGAGAGAAAGAGAAGTTGAAAGTGTCACCATGGCCAACTACTTGATGCTGCTCTCTGCAGGAGGTGAGTTTGAGAACAGAAACTACTTGAAGTACTCCTCCAACAACCGTGTGTTCGAGTGCAAGACATGTAAGAGACAGTTCCCATCGTTTCAGGCCTTGGGAGGGCACCGTGCAAGTCACAAGAAACCTAGGTTGATGATGGGAGAGAGTGACCATAACCAAGTTCTTCATGGTTCACCACCAAAGCCTAAGACACATGAGTGTTCCATCTGTGGTTTGGAGTTTGCCATAGGGCAAGCTTTGGGAGGACATATGAGACGCCATAGAACATCATCATCAACAAATGGAAGCATGCACAGTTCTTTGGTGAGTGGTAGAAGAGTTCATAATGGTTCACCTCAGAAGGGTGAGAAGAAGAGAGTTCTGTTTCCTGATTTGAATCTGACGCCATCAGAGAATGATTTGGAGATTTTGAAGATCAGAACACCAACTCCTTTGCTTCACTGCTTCAATTGA 525 0.4495 MMKREREVESVTMANYLMLLSAGGEFENRNYLKYSSNNRVFECKTCKRQFPSFQALGGHRASHKKPRLMMGESDHNQVLHGSPPKPKTHECSICGLEFAIGQALGGHMRRHRTSSSTNGSMHSSLVSGRRVHNGSPQKGEKKRVLFPDLNLTPSENDLEILKIRTPTPLLHCFN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0114 174 MobiDBLite consensus disorder prediction 109 144 - -
Pvu7g0114 174 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Pvu7g0114 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Pvu7g0114 174 SUPERFAMILY beta-beta-alpha zinc fingers 39 111 IPR036236 -
Pvu7g0114 174 SMART c2h2final6 41 63 IPR013087 -
Pvu7g0114 174 SMART c2h2final6 89 111 IPR013087 -
Pvu7g0114 174 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Pvu7g0114 174 PANTHER ZINC FINGER PROTEIN ZAT5 12 160 - -
Pvu7g0114 174 MobiDBLite consensus disorder prediction 109 131 - -
Pvu7g0114 174 Gene3D Classic Zinc Finger 21 115 - -
Pvu7g0114 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Pvu7g0114 174 PANTHER ZINC FINGER PROTEIN ZAT12 12 160 - -
Pvu7g0114 174 Pfam C2H2-type zinc finger 40 66 - -
Pvu7g0114 174 Pfam C2H2-type zinc finger 89 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0114 Pvu-Chr7 789289 790027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0114 2 168 C2H2 Transcription Factor Family AT2G37430 43.182 7.89e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu7g0114 zf-C2H2_6 1.4e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0114 - - gmx:100781134 217.238