Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0083 ATGTCATCTCGCATTGTTGCGGATCATTCATTGTCTCTCACTAATGTCACCACTCCCTATATCGACTTCATGGAAATGGACAACCTCACGCGCCGCCCCGTCTCGGCGGAGAAGCCCACCCTTGGGCAGCTCCTCAACCATGTTGGAGACGCTAGGAAGGAAGCCGCCGGTGATGGAAGCGAGACGCCGGGGCATCATGCTCTCGATATAGTTGACGGCGCCGGAGTTGGAGTTGGACCTTGCTCCCTGCCATTTGTTCTCTCCTTCAGCAACCTCACCTACAGCGTCAAGGCGCGCCGCAAAATGAGCCTGTCGTCGATGTTCCCCCGCCGGAGTAGCGACCTCGGCGCGTCTGAGGTGGCTGAGAATCCTGCTGCCGGCGAGAGGATGTTCGGGCGGACCAAGACGCTGCTGAACGATATATCCGGCGAGGCGCGCGACGGCGAGATCATGGCGGTGCTCGGCGCCAGCGGTTCTGGAAAGTCAACGCTGATCGACGCGCTGGCGAACCGAATCGCCAAGGGAAGTCTAAAAGGCACGGTGACGCTGAACGGGGAGACGCTGGAATCGCGTCTTCTGAAGGTGATTTCCGCGTACGTGATGCAAGACGACTTACTCTTCCCGATGCTCACTGTGGAAGAGACTCTGATGTTCGCAGCGGAGTTCAGACTTCCGCGCACGCTATCCAAGTCGAAGAAAAGCGCGCGCGTTCAGGCTCTCATTGATCAGCTAGGTCTCCGGAACGCCGCGAAGACAGTCATCGGCGACGAAGGCCACCGCGGAGTGTCCGGCGGAGAGCGGCGGAGAGTCTCCATCGGCATCGACATCATCCACGACCCGATCCTGCTGTTCCTCGACGAGCCAACCTCAGGACTTGACTCCACGAGCGCGTTCTTGGTGGTGAAGGTTTTGCAGAGAATCGCACAGAGCGGGAGCATCGTGATCATGTCCATTCACCAACCGAGTTACCGAATCCTAGGGCTTCTGGACCGCATGATCTTCTTATCACGCGGCCAAACCGTCTACAGCGGTTCACCCTCGCAGTTACCGGTTTTCTTCTCCGAGTTCGGTCATCCAATTCCGGAAACCGACAACAGAACCGAGTTCGCCTTAGACCTGATTCGCGAACTCGAAGGCTCCCCCGGCGGAACGAAGAGCTTGGTCGAGTTCAACAAGTCGTGGCAGAGCATGACGAAGCACAACCAAACCACTACGGAGGCGGAACGGAACGGTTTATCGTTGAAGGAAGCAATAAGCGCGAGCATTTCGCGAGGGAAGCTAGTATCCGGCGCGACGAACACGAACCCGAACCCGTCGTCTATGGTGCCAACTTCTGCAAATCCGTTTTGGATCGAGATGGCGACGCTGTGGAAGCGCTCGTTTCTGAACTCAAGAAGAATGCCAGAGGTTTTCGGGATCAGATTGGGTGCAGTGATGGTGACAGGGTTCATTCTCGCCACCATGTTTTGGCAACTCGACGACTCTCCCAAAGGAGTGCAAGAGCGGTTGGGATTCTTCGCCTTCGCCATGTCAACAACTTTCTACACTACCGCAGACGCGCTTCCCGTGTTCCTCCAAGAACGCTACATCTTCATGAGGGAAACCGCTTACAACGCTTATCGCAGGTTGTCGTATTTGGTCTCGCACGCGCTGGTTGCGTTGCCGGCGCTAGCGTTCCTCTCGCTGGCTTTCGCGGCAACAACTTTCTGGGCCGTGGGCCTGGACGGTGGAGTTTCGGGCTTTTTGTTTTATTTCCTGATCATTTTTGCTTCCTTCTGGGCCGGGAATTCCTTCGTGACGTTCCTTTCCGGTGTGGTGCCTCACGTGATGCTGGGTTACACCATCGTGGTGGCCATTCTCGCGTACTTCTTGCTCTTCAGTGGGTTCTTCATCAACAGGGATAGGATTCCCAGTTACTGGATTTGGTTCCACTACTTGTCGCTGGTGAAGTATCCCTACGAAGCGGTTTTGCAGAACGAGTTCGAACACTCGCTGAAGTGCTTCGTGAGGGGGGTTCAGATTTTCGATAACACGCCTCTTGGGTCAGTGCCGCAGGCTCTGAAGCTTCAGCTTTTGGACGCCATGAGCAACACTCTGGGAATCAACATCACCACCTCCACGTGTTTGACCACGGGTTCCGACATTTTGCGGCAGAACGGGGTGACCGATTTCTCCAAGTGGAACTGCTTGTGGATCACAGTGGCATGGGGATTCTTCTTTAGATTCCTCTTTTACTTCTCCCTCTTGCTGGGTAGCAAGAACAAGAGGAGCTGA 2274 0.5567 MSSRIVADHSLSLTNVTTPYIDFMEMDNLTRRPVSAEKPTLGQLLNHVGDARKEAAGDGSETPGHHALDIVDGAGVGVGPCSLPFVLSFSNLTYSVKARRKMSLSSMFPRRSSDLGASEVAENPAAGERMFGRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGETLESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKSARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFLVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPVFFSEFGHPIPETDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKHNQTTTEAERNGLSLKEAISASISRGKLVSGATNTNPNPSSMVPTSANPFWIEMATLWKRSFLNSRRMPEVFGIRLGAVMVTGFILATMFWQLDDSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRLSYLVSHALVALPALAFLSLAFAATTFWAVGLDGGVSGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFEHSLKCFVRGVQIFDNTPLGSVPQALKLQLLDAMSNTLGINITTSTCLTTGSDILRQNGVTDFSKWNCLWITVAWGFFFRFLFYFSLLLGSKNKRS* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0083 757 SMART AAA_5 147 339 IPR003593 -
Pvu7g0083 757 ProSitePatterns ABC transporters family signature. 262 276 IPR017871 GO:0005524
Pvu7g0083 757 Pfam ABC-2 type transporter 319 378 IPR043926 GO:0140359
Pvu7g0083 757 Pfam ABC-2 type transporter 454 661 IPR013525 GO:0016020|GO:0140359
Pvu7g0083 757 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 751 - -
Pvu7g0083 757 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 115 362 IPR003439 GO:0005524
Pvu7g0083 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 349 IPR027417 -
Pvu7g0083 757 Gene3D - 129 351 IPR027417 -
Pvu7g0083 757 PANTHER ABC TRANSPORTER G FAMILY MEMBER 6-LIKE 18 751 - -
Pvu7g0083 757 Pfam ABC transporter 138 290 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0083 Pvu-Chr7 575149 577422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0083 137 349 Calmodulin-binding Proteins AT2G36910 29.091 5.65e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0083 K05681 - gmx:100803658 1275.77