Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0079 ATGCCGTTTCGAGCTCGCACTGCAACTGCAAGCTTGCGGTGGTCTCTTCATTCTCTTCACCTTGGCTTCTGTTCTCTGGCTCTGTCAAAACCTCACCAGTTTTTGCCATGGTTGGAGCGGAAAGCTGCTTCTGCAGTTTCCTCCTCGCTTTTCATCGGGAAATCTTCGTATGGAAGGTCTCTGTTTGCTTCCAAGACAATACAAACTGGAGATTGCATTTTAAAGGTTCCTTACAGAGTGCAAATAACTGCTGATAATCTCCCTCCTGAAATCAAATCTTTGATCGGTGAGCAAGTTGGAGATATTGCGAAACTTGCTATTGTTATTCTCACTGAGAAGAAATTGGGTCAGGGCTCTGAATGGTATCCTTATATCAGCTGTCTTCCACAGCTAAGGGAGCTGCACAATACGGTATTTTGGAATGAAAGTGAGCTGGACATGATTCGTCCAAGTTCAGTTTATCAGGAAACTATTGACCATAGGTCTCAAATTGAAAAGGACTTTTTGACAATCAAGCGTGTTTTTGAATCTGTCCATATAAGTTTTGAAGATTTTACTTTCAAGGACTTCATGCATGCATGCACACTAGTTGGTTCTCGAGCATGGGGAAGCACAAAGGGTTTAGCTCTGATTCCATTTGCAGATTTCTTAAACCATGATGGAGTTTCAGAAGCAATTGTAATGAGTGATGATGACAAACAATGCTCAGAAATTATTGCTGATCGTGACTATGCCCCTGATGAACAGGTCCTAATAAGATATGGAAAGTTTTCAAATGCTACTCTAGTGCTGGACTTTGGTTTTACAGTTCCATACAACATTTACGATCAGGTTAAGATCCAGTTTGATGTACCTAAGCACGATCCTTTGCATGACATGAAGTTGGAGCTCTTGCATCGAAACATTGTACCTCATCCTAAAGATATGAAGGACTTGACATATCCTCTGAATACCTTCAGTATCAAGGAGGTGAAGTCAGATAGAGGAAAAGGGAAGGGTCTTCCACAGTCACTTCGTGCGCTTGCTCGTGTTCTTTCTTGTACCACATCTCAGGAACTTGACGATTTGGTCGAGGAAGCTGCTCAAAATGATGGAAGGCTAGCTAGGCGCCCTTTAAAGGATATCACCAAAGAGATACAAGCACACTTGATGTTGTTATCGGTATTCATCCAATTAATTGAGGAGCGCAATGGGACTATTACGTCACTGGGTTCTTGCCATTGCCCTCCCTTCTGTGAAAGTCTTTTTGTTAGAAGAGTAATGGCTCAAGATCTCCTATTCGGTGAGCTTCGCATTCTCAAATCTGCTTCTGCCTGGCTGGAGAACTACTGTTTCTCCTTGACTTGTTGA 1350 0.4252 MPFRARTATASLRWSLHSLHLGFCSLALSKPHQFLPWLERKAASAVSSSLFIGKSSYGRSLFASKTIQTGDCILKVPYRVQITADNLPPEIKSLIGEQVGDIAKLAIVILTEKKLGQGSEWYPYISCLPQLRELHNTVFWNESELDMIRPSSVYQETIDHRSQIEKDFLTIKRVFESVHISFEDFTFKDFMHACTLVGSRAWGSTKGLALIPFADFLNHDGVSEAIVMSDDDKQCSEIIADRDYAPDEQVLIRYGKFSNATLVLDFGFTVPYNIYDQVKIQFDVPKHDPLHDMKLELLHRNIVPHPKDMKDLTYPLNTFSIKEVKSDRGKGKGLPQSLRALARVLSCTTSQELDDLVEEAAQNDGRLARRPLKDITKEIQAHLMLLSVFIQLIEERNGTITSLGSCHCPPFCESLFVRRVMAQDLLFGELRILKSASAWLENYCFSLTC* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0079 449 Pfam SET domain 58 255 IPR001214 GO:0005515
Pvu7g0079 449 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 29 442 - -
Pvu7g0079 449 PANTHER OS01G0976450 PROTEIN 29 442 - -
Pvu7g0079 449 Pfam Rubisco LSMT substrate-binding 286 400 IPR015353 -
Pvu7g0079 449 Gene3D - 271 443 IPR036464 -
Pvu7g0079 449 SUPERFAMILY SET domain 31 273 IPR046341 -
Pvu7g0079 449 Gene3D set domain protein methyltransferase, domain 1 29 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0079 Pvu-Chr7 539822 546058 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu7g0079 SET 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0079 K19199 - gmx:100818002 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0079 7 539822 546058 Pvu7g0079 7 539822 546058 ECH