Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0048 ATGGCCATGAACTCCACCAAGTCCAACAACTTCAGCGCCACACTCTTTCCTCTCTCGGCTTCCAACACCGTTTCAAAGAGAGAAGCCTTAGCGGTGAAAGGAATGAGCCAACTGGGGTTGAACCAAAGGGTCGAAAGCCTGAGAAAAATCTCATTGGCCACGAAAAGCAGAGCAGTGATGTTTCATGGTAATGCTGCAGAAAAAGTGAAGGGCAAAGAGGTTCTGAGGGGTCAGTTTTGGGGTTCATTAGGTGATGGTGGCGACACTGAGAGGATCTTAAGAGCGAGTGAGATAGTGAGAGTGAAACTGGAGAATGCAGTTTGCAATGCAATTACAGAGCAGAGTAATAAGAAAGCGAAGGAGATGGTGCAAGCCAAACTCCTCTCTGCCTCACCATTCGCTTCTGAAACTGATGCTGTTGGTGGCACTTCATCAACACAGCTTGCGATCATTGCACCACTCCAAAGGGGAAGTTTTCTGAACCATTTTGCTTATCCCTTCCCCAACAACTGTAAAAGTTCCCATTTTTCAGAGAGTGAGGTTGATAAAAGCATGACCCTGTGTGCAACTCCATTGAGTGTTTGTTTTCCCCACGAAAGCAACTATGGGAGGGAGAAGACGAGAAACAGCAACGTGGGTGGTGAAGCAGTTGAGGATGTTTGTTGCAGGGAGGATGATGAGAGGGAATACGATGGTCGGATGCACAGCAATCCGTACAAGAAGAACGGACCGTACACGTGCCCGAAGTGCGGGTGCGTGTTTGAGACGTCGCAAAGATTTGCGGCGCACGTGAGTTGGAGGCACTACAAGTACGAGACGAAGAGTGAGAGGAAGAAGAGAATGATGGCGAAAATACGAAGGAGGAGTCTGCGTCTTGAATGGGAAAATGGTGCACTCACTGTTGTTGCTGACCATGATGCTCCCAGAGCCACTGCTTTTGGTTTTGCAGGAAACAATACCAACGTTGCTGCTCCTCCTGCTACTGCTACTGCTCCTGTTGAGGTGAAGACTGAAACTGAGACTGGTGTGGGGCTTCAGCTTGCTCCTCCTCCGGGGTGGCCAAAAAGAACTGGTGGTGGACCAGAATCTGCAGGAGGTTGCAGAATAAAAATGGAGGCATTAGACAATTGA 1131 0.4889 MAMNSTKSNNFSATLFPLSASNTVSKREALAVKGMSQLGLNQRVESLRKISLATKSRAVMFHGNAAEKVKGKEVLRGQFWGSLGDGGDTERILRASEIVRVKLENAVCNAITEQSNKKAKEMVQAKLLSASPFASETDAVGGTSSTQLAIIAPLQRGSFLNHFAYPFPNNCKSSHFSESEVDKSMTLCATPLSVCFPHESNYGREKTRNSNVGGEAVEDVCCREDDEREYDGRMHSNPYKKNGPYTCPKCGCVFETSQRFAAHVSWRHYKYETKSERKKRMMAKIRRRSLRLEWENGALTVVADHDAPRATAFGFAGNNTNVAAPPATATAPVEVKTETETGVGLQLAPPPGWPKRTGGGPESAGGCRIKMEALDN* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0048 376 MobiDBLite consensus disorder prediction 342 366 - -
Pvu7g0048 376 ProSitePatterns Zinc finger C2H2 type domain signature. 247 268 IPR013087 -
Pvu7g0048 376 ProSiteProfiles Zinc finger C2H2 type domain profile. 245 273 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0048 187 295 C2H2 Transcription Factor Family AT2G18490 39.130 2.89e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu7g0048 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0048 - - vun:114189574 520.005