Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0042 ATGCGTCGGTGGCTTTGCTGCACTTGTCAGGTGGAAGAGTCTTACCCATCCAACGAAAATGAACACCTGAAAAGCCCAAGGAATTATGGAGACAGCAACCAAAAAGGCTCAAAGGTGTTACCTCCTGTGAAGCCTGAAACACAAAAGGCACCACCACCTATTGAAGCTCCCGCCCTATCTTTAGATGAGCTGAAGGAAAAGACTGACAACTTTGGTTCTAAGGCATTAATTGGCGAGGGATCGTACGGAAGGGTGTATTATGCAACCTTAAACAATGGAAAAGCAGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCCGAATCAAATAACGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGATTGAAGAATGATAATTTTGTTGAGTTGCATGGTTACTGTGTTGAAGGAAATCTTCGTGTACTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGTGCACAACCAGGGCCAACTCTTGATTGGATACAGCGAGTTCGAATCGCAGTTGACGCGGCAAGGGGATTGGAGTATTTACATGAGAAAGTTCAGCCACCGATTATACACAGGGATATCAGATCAAGTAATGTGCTGATCTTTGAAGAGTACAAGGCTAAGATAGCTGACTTTAACCTTTCTAATCAGGCCCCTGACATGGCTGCACGCCTCCATTCAACTCGTGTATTGGGAACTTTTGGGTATCATGCTCCAGAATATGCAATGACTGGGCAGTTGACTCAAAAAAGTGATGTCTATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAACCTGTTGACCACACCATGCCTCGAGGACAGCAGAGTCTTGTCACATGGGCTACTCCACGATTGAGTGAAGATAAAGTGAAACAGTGCGTAGACCCAAAACTGAAAGGAGAATACCCCCCTAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCACTCTGCGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGACTCCTGCTCCTGCTCCTGCTCCAGAAAGTTGA 1095 0.4484 MRRWLCCTCQVEESYPSNENEHLKSPRNYGDSNQKGSKVLPPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEEYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAPAPAPES* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0042 364 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 1 363 - -
Pvu7g0042 364 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g0042 364 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 363 - -
Pvu7g0042 364 SUPERFAMILY Protein kinase-like (PK-like) 50 349 IPR011009 -
Pvu7g0042 364 PIRSF ILK 13 357 - -
Pvu7g0042 364 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Pvu7g0042 364 MobiDBLite consensus disorder prediction 15 54 - -
Pvu7g0042 364 Pfam Protein tyrosine and serine/threonine kinase 76 349 IPR001245 GO:0004672|GO:0006468
Pvu7g0042 364 Gene3D Phosphorylase Kinase; domain 1 44 147 - -
Pvu7g0042 364 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Pvu7g0042 364 Gene3D Transferase(Phosphotransferase) domain 1 149 357 - -
Pvu7g0042 364 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0042 Pvu-Chr7 280074 284782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0042 5 350 Receptor kinase-like Gene Family AT4G02010 46.132 5.09e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pvu7g0042 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0042 K13436 - gmx:548003 696.427