Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0036 ATGCCGAGCTTCAATTCACAATTGCCCAATTCCAATGCATGCTGTACAGAGGGAAGCACAGTTGATTCTTTTCGTGTGTCTGACTTTGATCAATCAGTTGGATATCGCATAGAGGATGCTGTTGCCTTGAGTGGAAACTCAATTTTTGACTCACTTAAAGTAAGTAGCCAAACAATTTCTCGAGGTCCTGTTCTACTTGGTTCCTTTGATAATTCGCCAACTTCACTTGACAAAAGCCCTTTAACAAACCAAACAGAGCGGGGAAGCTTGCAATTCCAAAAGTTCCACTCATCAAATTTGGTTACTGGTGATAAAGAACACCGGGAAGAGTTTGCCATGGCTGATGCTAGTCCTAGAACTGATATTTCTACAGATGCTGACACTGACGATAAGAATCCACAGTTTGATAGAAGTCATGCCCTTGTTGCTGCGGCTTCTGACTCCAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCTGCAAGAAAAAGCCGACTGAGAAAGAAAGCTTATGTTCAGCAGCTGGAAAGTAGTCGTTTAAAGCTGACCCAACTGGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTTATATCAAGTTCAGGTGATCAAGCGCATTCAATGAGTGGAAATGGGGCCATGGCATTTGACGTAGAATATGCAAGGTGGGTGGAAGAGCAGAATCGACAAATTAACGAACTAAGAGCAGCTGTAAATTCTCACGCAGGTGATACAGAACTCTGCATGATTATCGATGGTGTAATGGCACATTATGATGAGATCTTTAGGCTGAAGGGCAATGCAGCTAAGGCTGATGTCTTCCATTTGTTGTCTGGCATGTGGAAAACACCAGCTGAGAGGTGTTTCCTATGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGTAAATCAGTTGGAACCTCTGACGGAGCAGCAGTTAGTGGGTATCACCAACTTGCAGCAATCTTCCCAACAGGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAGCAGTCCCTTTCGGAGACATTATCCACTGGATCACTGGGCTCCTCTGGTTCATCAGGCAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGCAAATTAGGGACACTCGAGGGCTTCATTAAGCAGGCTGACAATTTGCGGCAGCAAACACTGCAACAAATTCATCGGATACTGACAACTCGGCAATCGGCTCGTGCACTGCTTGCAATACATGATTACTTTTCCAGGCTGCGTGCTCTCAGCTCTCTTTGGCTTGCTCGCCCAAGAGACTGA 1335 0.4614 MPSFNSQLPNSNACCTEGSTVDSFRVSDFDQSVGYRIEDAVALSGNSIFDSLKVSSQTISRGPVLLGSFDNSPTSLDKSPLTNQTERGSLQFQKFHSSNLVTGDKEHREEFAMADASPRTDISTDADTDDKNPQFDRSHALVAAASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGDQAHSMSGNGAMAFDVEYARWVEEQNRQINELRAAVNSHAGDTELCMIIDGVMAHYDEIFRLKGNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSETLSTGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIKQADNLRQQTLQQIHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0036 444 CDD bZIP_HBP1b-like 159 211 - -
Pvu7g0036 444 SMART brlzneu 155 218 IPR004827 GO:0003700|GO:0006355
Pvu7g0036 444 Pfam Seed dormancy control 241 316 IPR025422 GO:0006351|GO:0043565
Pvu7g0036 444 Coils Coil 178 205 - -
Pvu7g0036 444 Coils Coil 235 255 - -
Pvu7g0036 444 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Pvu7g0036 444 MobiDBLite consensus disorder prediction 112 161 - -
Pvu7g0036 444 Pfam Basic region leucine zipper 155 201 IPR004827 GO:0003700|GO:0006355
Pvu7g0036 444 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 46 444 - -
Pvu7g0036 444 MobiDBLite consensus disorder prediction 122 136 - -
Pvu7g0036 444 Gene3D - 158 207 - -
Pvu7g0036 444 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Pvu7g0036 444 ProSiteProfiles DOG1 domain profile. 224 441 IPR025422 GO:0006351|GO:0043565
Pvu7g0036 444 PANTHER TRANSCRIPTION FACTOR TGA9 46 444 - -
Pvu7g0036 444 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0036 Pvu-Chr7 234003 241418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0036 113 444 bZIP Transcription Factor Family AT3G12250 80.120 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu7g0036 DOG1 2.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0036 K14431 - gmx:100816123 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0036 7 234003 241418 Pvu7g0036 7 234003 241418 ECH