Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0011 ATGATATATATGTTGTTAGAGTGGCAGTGGCAGTTGCAGACTCAATCCATGGCAGCTGCATTTGCATCTTCGACTCCCTCACTGAGACTGTCAAATTTTGGAGAAATCAAAGGTTTGCACCTTCCTAACCCTAATCCTAATAACCTCAAGCTTAGGAGGCGGGGGTCTGGGTTTGGCGGTTGTTATGGAGTGACATTGAGTGTGAGAGAAAGGGCCGTTGGAAGGGGTTTGAGGGTTCGGGCGAGTTCTTCTTCTTCGGGGGAGGACGCAATTGTTCAGGCCAAAGTTACTCAGAAAGTGTTCTTCGACATCGGTATCGGAAATCCAGTTGGGAAGCTTGTGGGAAGGGTTGTGATTGGACTGTATGGCGACGATGTTCCCCAAACAGCTGAGAACTTCCGCGCCCTCTGCACCGGAGAGAAGGGCTTTGGCTATAAGGGCTCTTCCTTCCATCGTGTCATCAAGGATTTCATGATTCAAGGAGGCGATTTTGACAAAGGAAATGGAACTGGAGGCAAAAGTATATATGGTCGCACTTTCAAAGATGAGAATTTTGTTTTGTCTCATACTGGACCCGGGGTTGTTAGCATGGCAAATGCAGGTCCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGACACCATGGTTGGATCAAAGACATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTGGTCGAATCCCAGGAGACAGATAGGGGTGACCGTCCTAAGAAAAACGTGACCATCATCGACTGTGGCGAGATTCCAATTGCTTGA 798 0.4737 MIYMLLEWQWQLQTQSMAAAFASSTPSLRLSNFGEIKGLHLPNPNPNNLKLRRRGSGFGGCYGVTLSVRERAVGRGLRVRASSSSSGEDAIVQAKVTQKVFFDIGIGNPVGKLVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFVLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLVESQETDRGDRPKKNVTIIDCGEIPIA* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0011 265 Gene3D - 85 264 IPR029000 -
Pvu7g0011 265 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 145 162 IPR020892 GO:0003755|GO:0006457
Pvu7g0011 265 SUPERFAMILY Cyclophilin-like 92 262 IPR029000 -
Pvu7g0011 265 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 65 264 - -
Pvu7g0011 265 CDD cyclophilin_ABH_like 99 260 - -
Pvu7g0011 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Pvu7g0011 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 162 IPR002130 GO:0000413|GO:0003755
Pvu7g0011 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 193 208 IPR002130 GO:0000413|GO:0003755
Pvu7g0011 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 220 IPR002130 GO:0000413|GO:0003755
Pvu7g0011 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 221 236 IPR002130 GO:0000413|GO:0003755
Pvu7g0011 265 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 111 261 IPR002130 GO:0000413|GO:0003755
Pvu7g0011 265 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 115 260 IPR002130 GO:0000413|GO:0003755
Pvu7g0011 265 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0011 Pvu-Chr7 60281 63181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0011 115 259 U-box Gene Family AT5G67530 47.945 1.56e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0011 K03768 - gmx:100777088 394.815