Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0004 ATGGCTTTAGAGCAGGAATTGTCGCTGGGTCAGAGTAGGAATCCGAACCCAGTTGACGGCGTGGATGTTCGGGGGGAGGGTGGAGATGAGGGAGGGAAAGCCCCGAGACTGCCTCGGTGGACAAGGCAAGAAATTCTGGTTCTGATACAGGGAAAGAGAGACGCTGAGAACAAGTTCAGGAGGGGTCGAACGGCCGGATTGCCATTAGGGTCGGGTCAGGTCGAGCCCAAATGGGCTTCAGTTTCTTCCTACTGCAGAAAGCATGGAGTCAACAGAGGTCCTGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAGAGAATGGGAGTCTCAGCTAAGGGAGGACTCCGATTCCTTTTGGGTCATGAGAAACGATTTAAGGAGAGACAGGAAATTGCCCGGTTTTTTCGACAAGGAGGTTTATGATATTCTCGATTCAGGCTCCCAAGCTCCTCCGCCGTTGCCTCTCGCTCTTCCGTCGCCTCCATCAATCACAGTAACGGTCTGCAAGGACATGGACATGGACTCCAAAAGAGGGTCTGCCCCTGCCCCTTCCCCTGCCCCTGCTGATCCTGCGGAGCCTCATCTCTATGATAGTAATCGCAGTGTGCCTGTTGAGGATGGCTTGTTCTCAGATTTTGAACAAGATGAATTCTCTGCCAGTCCTGAGAAAAAGGACATTTTGCCGCCCTCCAACAGGGACTTTCCTGCTCCCATTCCTCTATCAGAAAAGCAATATCAACCACTCCTCCGTGGATGCCAAGGGGAAGGTGTGACTAACGAGAAACGGAGAACTCCAAATCCAGAAATGGGTTCAAGTTCTCAAGGAGAGCGGAAAAGGAAGCGATTAGCAAGTGATGGAGGGGAGGAGAGTTTGCAAATTCATTTAATTGATGTCTTAGAAAGAAATGGGAAGATGCTAAGTGCTCAACTTGAAGCGCAGAATATAAATTTCCAGTTGGATCGTGAGCAGCGGAAAGTCCATGGTAGTAATTTGGTTGCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTATAG 1071 0.4986 MALEQELSLGQSRNPNPVDGVDVRGEGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPLGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIREWESQLREDSDSFWVMRNDLRRDRKLPGFFDKEVYDILDSGSQAPPPLPLALPSPPSITVTVCKDMDMDSKRGSAPAPSPAPADPAEPHLYDSNRSVPVEDGLFSDFEQDEFSASPEKKDILPPSNRDFPAPIPLSEKQYQPLLRGCQGEGVTNEKRRTPNPEMGSSSQGERKRKRLASDGGEESLQIHLIDVLERNGKMLSAQLEAQNINFQLDREQRKVHGSNLVAVLDKLADALGRIADKL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0004 356 MobiDBLite consensus disorder prediction 222 293 - -
Pvu7g0004 356 Gene3D - 40 110 - -
Pvu7g0004 356 MobiDBLite consensus disorder prediction 23 37 - -
Pvu7g0004 356 ProSiteProfiles Myb-like domain profile. 39 105 IPR001005 -
Pvu7g0004 356 MobiDBLite consensus disorder prediction 1 38 - -
Pvu7g0004 356 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 19 356 - -
Pvu7g0004 356 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 19 356 - -
Pvu7g0004 356 CDD GT1 38 112 - -
Pvu7g0004 356 MobiDBLite consensus disorder prediction 179 210 - -
Pvu7g0004 356 Pfam Myb/SANT-like DNA-binding domain 39 128 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0004 Pvu-Chr7 25317 28313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0004 11 164 Trihelix Transcription Factor Family AT1G76890 24.204 2.08e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g0004 Myb_DNA-bind_4 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0004 - - vra:106771947 579.711