Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2268 ATGGGAGAGGACTCGCCCAAAAACAAAGTCAAATTCCTCTGCAGCTACGCCGGCAAGGTCCTTCCACGGCCCTCCGACGGCCTCCTCAGGTACGTCGGCGGCGAGACTCGGGTCGTTTCAGTGCACCGCGACATCACCTTCTCCGAGCTGATGAAGAAGGTGGGGAGCATGGTGGAGGGGGAGGTGGTGCTCAAGTACCAGCTCGTCCCCGAAGATCTGGACGCGTTGGTGTCGGTTAGGACGGAGGAAGACGTGAAGCACATGATCCAGGAGCACGACCGCCACCACACCGGATTGCTCCGTGCGTTCCTCTTTCCCCCTTTCCGGCCGCCTCTGCCTGCCTCCGAACCCTATCTCTTGGAGCAGCGTTACATCGACGCCATCAATGGGATCCTCCGAACAAGCCCTAGGGCTACCAGGGGCTCTGCCTGTTCTTCCCCTGTATCAACCTCACCCGATGCAGGGGACATGTACTCCCCTCGCTTTCCCAATTCCAATTCCCATTGTAGTGCGATGCAGAGAGTGCGAAGCTCTCCGAATCTGACGAACATGGGTGGATTGGATCAGCAAGGTCATCATTATCAGCAGCATCATCCCCATCTTCCTTTTCACAACTATCCCTCTTTCTCTACTTCTAGACCACCCCAAGATCCTCAAATGGGAAGGCTTGGAGGAAGGGGTACCTCCATTAACTACCACTACTCAAACACCAGACAACAACCCCACAGAGGAGGAGGCTACGGCGGCTACCCTGATGACTCTGCAGCCTATGGGAATGCCCATCTTCCCCTTCATAGCCTCTCCAGAAGTCCTAGAAGGAAAACTGTATGGGACTAA 837 0.5591 MGEDSPKNKVKFLCSYAGKVLPRPSDGLLRYVGGETRVVSVHRDITFSELMKKVGSMVEGEVVLKYQLVPEDLDALVSVRTEEDVKHMIQEHDRHHTGLLRAFLFPPFRPPLPASEPYLLEQRYIDAINGILRTSPRATRGSACSSPVSTSPDAGDMYSPRFPNSNSHCSAMQRVRSSPNLTNMGGLDQQGHHYQQHHPHLPFHNYPSFSTSRPPQDPQMGRLGGRGTSINYHYSNTRQQPHRGGGYGGYPDDSAAYGNAHLPLHSLSRSPRRKTVWD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2268 278 CDD PB1_UP2 13 101 - -
Pvu6g2268 278 MobiDBLite consensus disorder prediction 210 252 - -
Pvu6g2268 278 SMART PB1_new 24 107 IPR000270 GO:0005515
Pvu6g2268 278 Pfam PB1 domain 29 106 IPR000270 GO:0005515
Pvu6g2268 278 PANTHER OS05G0427100 PROTEIN 4 239 - -
Pvu6g2268 278 SUPERFAMILY CAD & PB1 domains 25 107 - -
Pvu6g2268 278 Gene3D - 30 105 - -
Pvu6g2268 278 PANTHER OS05G0427100 PROTEIN-RELATED 4 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2268 Pvu-Chr6 31822605 31823575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2268 3 143 MAP Kinase Kinase Kinase AT3G46920 42.857 2.62e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2268 - - vun:114186951 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2268 6 31822605 31823575 Pvu6g2268 6 31822605 31823575 ECH