Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2251 ATGGAAGAGTTTGAGTATGAAGAGGTTGTGAAAGCAACAGAAAACTTCAACCCCAGAAGGGTGGTAGGGAAAGGAAGCCATGGCATGGTGTACAAAGGCGTTGTTCAGTTCAAAGAGAACAACAGCTACAGAGTGGTCGCTGTAAAGAAGCCATCACAGGGCCTTCAATCTCTTCACGATAACTCCAAACTCCAAAACGAAATCCGAGTTCTTTCCTCTCTACCCGAAAACCCTCATGTGGTTAATCTTCTAGGAACCACCAGTGGTGATGATGATCACAGCCACAAACTCATTGTGATGGAGTTCATGCCCAATGCCTCTCTCCATGACCTGCTTCATTCCAACGAAACCCCACCCACATGGCCCAAACGCGTTGAAATCGCCCTGCAAATCGCTCGTGCGGTGCAGTTTCTTCACCAAGCTAAGCCTGTGGTGATTCACAGAGACATCAAACCCACCAACATATTGTTTGATTCAAGTTGGAATGCGAAGTTGGGAGATTTTGGACTGGCGGTGAGAGGGGTTGACTCGGTGAGTCAACCCGCCGGGACAATAGGGTACTTGGACCCCTGTTACACCACCCCAGAGAGACTCAGCACGAAAAACGACATTTTTAGCTTTGGGGTTGTGTTGTTGGAGATCATAAGTGGCAGAAAGGCCATTGATGCGTGCAAAACGCCGGCTTCGGTTGTGGAATGGGCGATTCAGTTAATGGGTGAAGAACTTTTGGAAGAGATTTGTGACGACAGAGTGGCACTGCCGGGTTACATGGTTGGAACAATCACTCGCTTGTTACGCTATGCTTCACGTTGTGTGTCAGAGAATGAAGATGAACGTCCTTCAGCTGCTGAAGTTGTTATGGGAATGGAAAATTGTGTGGTGAAACGAGTGAGGGTCCCCGTTTGGACGTGCGTTTTGAAGGGGTTGGATTGGTTGAGAAAGAGGAAGGTGATGATGGGTAGTGTTTGGCAAACTCAGAAACGAATTCGGTGTATAGCAGAAGAAGAGGGTGAGGTAGACGGTGGTGAGGTAGACGGTGTGGGTGAGGTAGACGGTGTTGGTGTCCCAAGTGGGAAGATATCCATGACCATTAGGGAGGTTTTGGATGATGTTACATTGGATTGA 1125 0.4827 MEEFEYEEVVKATENFNPRRVVGKGSHGMVYKGVVQFKENNSYRVVAVKKPSQGLQSLHDNSKLQNEIRVLSSLPENPHVVNLLGTTSGDDDHSHKLIVMEFMPNASLHDLLHSNETPPTWPKRVEIALQIARAVQFLHQAKPVVIHRDIKPTNILFDSSWNAKLGDFGLAVRGVDSVSQPAGTIGYLDPCYTTPERLSTKNDIFSFGVVLLEIISGRKAIDACKTPASVVEWAIQLMGEELLEEICDDRVALPGYMVGTITRLLRYASRCVSENEDERPSAAEVVMGMENCVVKRVRVPVWTCVLKGLDWLRKRKVMMGSVWQTQKRIRCIAEEEGEVDGGEVDGVGEVDGVGVPSGKISMTIREVLDDVTLD* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2251 374 Gene3D Phosphorylase Kinase; domain 1 1 102 - -
Pvu6g2251 374 PANTHER - 1 324 - -
Pvu6g2251 374 PANTHER OS01G0750732 PROTEIN 1 324 - -
Pvu6g2251 374 ProSitePatterns Protein kinases ATP-binding region signature. 22 50 IPR017441 GO:0005524
Pvu6g2251 374 Pfam Protein kinase domain 19 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2251 374 ProSiteProfiles Protein kinase domain profile. 16 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2251 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pvu6g2251 374 SMART serkin_6 16 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2251 374 Gene3D Transferase(Phosphotransferase) domain 1 103 299 - -
Pvu6g2251 374 SUPERFAMILY Protein kinase-like (PK-like) 3 300 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2251 Pvu-Chr6 31712464 31714379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2251 4 300 Receptor kinase-like Gene Family AT3G59420 39.088 2.14e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu6g2251 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2251 - - lang:109334080 417.927