Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2248 ATGGCTACCATTTTCATCTTCATCTTCTTCTTCTTCCTCGTACCCTCTTATGGATTCGACTCGTTGGATCCTCTTGGCAACATCACCATCACATGGGATTATTTCTCCGACAACGGGAATTCAGTCGACGTGAGGGTATCACTGAACAACTTGCAGCTATTTCGTCACGTGGAGGAACCCGGTTGGAATTTGGGTTGGGCATGGAAAGGTGATGAGGTGATTTGGGCTATGTTGGGAGCAGAGGCAAAGGAGCAAGGGAATTGCACAAGATTTAGAGGACAACAGAAACCACACTGTTGCCAGAAGGAGCCTGTTATCATTGATCTCATGCCTGGAACCCCCTACAACATGCAGACTGCAAATTGCTGCAAAGGTGGGGTCCTAACATCCCTAAAACAAGATCATTCCAAAGGTGGCGCCACCTTCCAGATGAATTATATCAAAGCTTCAGTCTCCGATTCAGGTGGCAGTTTTAGCATGCCTGAGAATTTCACCCTTGGAGTTCCTGGCTATAGCTGTGGGACACCCTTTCAAGTCCCCCCAACCAAGTTTACCAAAGATGGACACAGATGGCAACAAGTCTTGGAGACTTGGAATGTGACTTGTATTTACTCCCAGTTTCTAGCATCACCTACTCCAACATGTTGTGTCTCTTTGTCTGCATTCTACAACAGTACCATTGTTCCTTGTCCCACATGCAGTTGTAATTGCCAAGGACTACCAGGAGCTACTAATTGCGTCGAGTGTTCACATCACATGTGCCCCATTAGCATTCACTGGCATGTGAAGCAAAGTTATAAAGAGCATTGGCGGGTCAAGATCACAATCACAAACATGAACTTTGTCAAAAACTATTCCCAGTGGAATTTGGTGGCGGTTCACCCTAACTTCCGAAGCGTAACCCAAGTCTTCAGTTTCAACTTCCAAACCCTATCAGTTTATGCAAATTTCAGTGACATAGGGATGTTTTGGGGGCTACCATACTACAATGACAGGTTGCTGACACATGGAGAGAATGGGCATGTGCAAACAGAGGTGTTACTACACAAAGATCGAGGAGAGTTCAGGTTCAACGAAGGATGGAGTTTTCCTAGAAAAATTTCATTCAATGGCGATGAGTGTGTGATGCCATCTCCTGATGCATACCCTACACTCCCCAACACAGCTCATATTTCCACAACAACCCTTCCCACAATTTTCCTTTCACTGTTACTGCTCTCAATTTGTTCTACATCTTTAGAATGA 1245 0.4514 MATIFIFIFFFFLVPSYGFDSLDPLGNITITWDYFSDNGNSVDVRVSLNNLQLFRHVEEPGWNLGWAWKGDEVIWAMLGAEAKEQGNCTRFRGQQKPHCCQKEPVIIDLMPGTPYNMQTANCCKGGVLTSLKQDHSKGGATFQMNYIKASVSDSGGSFSMPENFTLGVPGYSCGTPFQVPPTKFTKDGHRWQQVLETWNVTCIYSQFLASPTPTCCVSLSAFYNSTIVPCPTCSCNCQGLPGATNCVECSHHMCPISIHWHVKQSYKEHWRVKITITNMNFVKNYSQWNLVAVHPNFRSVTQVFSFNFQTLSVYANFSDIGMFWGLPYYNDRLLTHGENGHVQTEVLLHKDRGEFRFNEGWSFPRKISFNGDECVMPSPDAYPTLPNTAHISTTTLPTIFLSLLLLSICSTSLE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2248 414 PIRSF COBRA 1 247 IPR006918 GO:0010215|GO:0031225
Pvu6g2248 414 PIRSF COBRA 239 413 IPR006918 GO:0010215|GO:0031225
Pvu6g2248 414 PANTHER COBRA-LIKE PROTEIN 6 5 407 - -
Pvu6g2248 414 Pfam COBRA-like protein 44 205 IPR006918 GO:0010215|GO:0031225
Pvu6g2248 414 PANTHER PROTEIN COBRA 5 407 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2248 Pvu-Chr6 31695264 31697898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2248 18 408 COBRA Gene Family AT3G29810 50.242 1.65e-151 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2248 - - lang:109329241 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2248 6 31695264 31697898 Pvu6g2248 6 31695264 31697898 ECH