Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2246 ATGGCTGTACATACAAAATTCCGTCTTATTACTTACTCACAAGAGATTGTAGATGGACAACCTATTTTTGTCTCTTCAAACTGTCTTCCGACGAAGGCTTTGAAATATGAACCTGCAGGTCATTCTTTCCATTCTGCTGCACTTAAACTTCGTGGTGTTCAGGAAGAGAAGAATGAGGCTGATGACAAAAAGGTGGTTGATGATAAGGAACAAACGTACCTTCCATCTGATTCTTATAGCAGCAAAAGCAAAAAGAAATCTGGTACTGGGGACAAGCAACAAGATCACTATGCATTATTGGGTCTGGGTCATCTAAGGTATCTGGCTACTGAGGATCAAATCCGTAAAAGCTATCGTGAAACTGCCTTGAGGTTTCATCCTGACAAGCAGGCTGCCCTTCTTTTGGCTGAGGAAACTGAAGCTGCGAAACAAGCAAAGAAGGATGAAATAGAAAGTCACTTCAAGGCAATCCAGGAAGCATATGAAGTGCTGACTGATTCTGTGAAGAGAAGGATTTATGATTCCACTGATGAGTTTGATGACGAGATTCCCACTGATTGTGCTCCACAAGATTTCTTTAAGGTGTTTGGTCCTGCTTTTATGAGGAACGGACGATGGTCGGTTAATCAACCAATTCCTACACTAGGTGATGATAATACTCCATTAAAAGAAGTTGATAATTTCTACAATTTTTGGTACTCCTTTAAAAGTTGGAGGGAGTTTCCACATGCTGATGAGTTTGATCTCGAGCAAGCTGAATCTCGAGACCACAAGAGGTGGATGGAAAGGCAGAATGCAAAATTGACAGAAAAAGCTAGGAAGGAGGACTATGCACGGATTCGTACTCTTGTTGATAATGCTTACAAGAGGGACCCCAGAATATCTAGAAGAAAGGAAGAAGAAAAAGCTCAGAAACAAAGGAAAAAGGAGGCTAAGTTCCTGGCAAAGAAATTGCAGGAAGAAGAAGCAGCCAGAATTGCAGAGGAGGAGAAGCAGAGAAAAGAGGAGGAAGAGAGACAAGCTGCAGAAGCTGCCTTACAACAGAAGAAGGTCAAAGAGAAAGAGAAAAAGCTGTTGCGAAAGGAGCGAGCTCGCCTCCGGACTCTTTCAGGACCTATTCTGTCCCAACGTTTGCTTGATATTTCTGATGATGATGTAGAAAGGCTTTGCATGTCACTTGATATTGAGCAGATGAGGAGTCTATGTGAGAACATGGAAGGCAGGCAGGTTTTATTAGAGCAAGCAAGTGTTTTGAGAGACGCTCTGAGCTCTAAGAAAGATGAGAAAACCATCAAGGCTGATGAGAAAACCAATCAACAAAATTCCAATGGTTCCATCAAGGCTAATGGCAGTGCTTCGAGAAGCAATGTTGAGAAGAAGGAGGAGAAACCTTGGAGTAAAGAAGAGATTGATCTACTGAGGAAAGGAATGCAGAAATACCCCAAAGGAACTTCAAGGAGATGGGAGGTTATTTCAGAATACATTGGTACTGGAAGATCTGTTGAAGAAATAATGAAGGCAACTAAAACTGTACTCCTCCAGAAACCTGATTCATCAAAAGCTTTTGACACTTTTCTTGAGAAAAGGAAACCTGGTGCACAATCAATTGAGTCTCCACTGACAACCAGAGAAGAATTAGAAGGGGTATCAACTCCAACTCCAACTCCTGCCTCAACCAATAACACAGAAGATTCTCACAGCAAGAATACAGATAATCAGAACTCTGCATCTGCTAATGGAGTTTCTTCCAGTTCAGAACAGGATGTGTGGTCTGCAGTGCATGAACGAGCACTGGTTCAAGCTCTAAAAGCCTTTCCAAAGGAAACAAGCCAGAGGTGGGAGAGAGTTGCAGCAGCTGTACCTGGGAAGACTGTGAATCAGTGTAAGAAAAAATTTGCAATGATGAAGGAGAATTTCAGGAACAAGAAAACTGCAGTCTAA 1941 0.4204 MAVHTKFRLITYSQEIVDGQPIFVSSNCLPTKALKYEPAGHSFHSAALKLRGVQEEKNEADDKKVVDDKEQTYLPSDSYSSKSKKKSGTGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRFHPDKQAALLLAEETEAAKQAKKDEIESHFKAIQEAYEVLTDSVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPTLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLTEKARKEDYARIRTLVDNAYKRDPRISRRKEEEKAQKQRKKEAKFLAKKLQEEEAARIAEEEKQRKEEEERQAAEAALQQKKVKEKEKKLLRKERARLRTLSGPILSQRLLDISDDDVERLCMSLDIEQMRSLCENMEGRQVLLEQASVLRDALSSKKDEKTIKADEKTNQQNSNGSIKANGSASRSNVEKKEEKPWSKEEIDLLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKAFDTFLEKRKPGAQSIESPLTTREELEGVSTPTPTPASTNNTEDSHSKNTDNQNSASANGVSSSSEQDVWSAVHERALVQALKAFPKETSQRWERVAAAVPGKTVNQCKKKFAMMKENFRNKKTAV* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2246 646 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 54 71 - -
Pvu6g2246 646 Coils Coil 301 369 - -
Pvu6g2246 646 ProSiteProfiles SANT domain profile. 585 640 IPR017884 -
Pvu6g2246 646 ProSiteProfiles Myb-like domain profile. 457 512 IPR001005 -
Pvu6g2246 646 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 1 643 - -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 525 588 - -
Pvu6g2246 646 SUPERFAMILY Homeodomain-like 588 642 IPR009057 -
Pvu6g2246 646 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 643 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Pvu6g2246 646 PRINTS DnaJ domain signature 100 118 IPR001623 -
Pvu6g2246 646 PRINTS DnaJ domain signature 118 133 IPR001623 -
Pvu6g2246 646 PRINTS DnaJ domain signature 149 169 IPR001623 -
Pvu6g2246 646 ProSiteProfiles Myb-like domain profile. 582 636 IPR001005 -
Pvu6g2246 646 Gene3D - 457 515 - -
Pvu6g2246 646 Pfam DnaJ domain 95 174 IPR001623 -
Pvu6g2246 646 SUPERFAMILY Homeodomain-like 463 507 IPR009057 -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 436 453 - -
Pvu6g2246 646 SMART dnaj_3 94 169 IPR001623 -
Pvu6g2246 646 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Pvu6g2246 646 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Pvu6g2246 646 CDD SANT 464 506 IPR001005 -
Pvu6g2246 646 SMART sant 461 514 IPR001005 -
Pvu6g2246 646 SMART sant 586 638 IPR001005 -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 329 352 - -
Pvu6g2246 646 CDD SANT 590 636 IPR001005 -
Pvu6g2246 646 Pfam Myb-like DNA-binding domain 463 504 IPR001005 -
Pvu6g2246 646 Gene3D DnaJ domain 78 187 IPR036869 -
Pvu6g2246 646 Gene3D - 580 646 - -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 291 312 - -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 54 92 - -
Pvu6g2246 646 CDD DnaJ 95 166 IPR001623 -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 535 588 - -
Pvu6g2246 646 MobiDBLite consensus disorder prediction 423 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2246 Pvu-Chr6 31689916 31691856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2246 96 294 C2H2 Transcription Factor Family AT1G74250 28.151 3.18e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu6g2246 DnaJ 4.7e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2246 K09522 - gmx:100806665 1010.36