Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2229 ATGAAGTTTGTTGTGATGATGATGTTGCTACCCTTGATGTTTGCAGTGTTTTGTTCCATGAGTTTGAGTTCTGCAGCACCTTCTCCTTCCACAACACCCACATGCCCCATAGACTTGAATTATGTGCTGAGAATCCCATGGAACACTTCTGCTTGTCACAACTTCCAACAACCTTTGGCAGCAAAAAATGGAACGGATGCAAACACTTGTTGCATATCACTGTTGTCCCTCTTTGGCGTGGGACTTGCACAGCATCTCAAAGAGACTTCTCAGTTCCAACTCCCCAACCTTGCTACCTCAGTTTCATGCATCCAAGACTTCCAATCCAAGCTCTCTACCCTTTCTCTCCCCAACAACCTTGCAGACTCTTGCTTTGACCCTCTTCAGTTTGTGATCTCCCCCAACATCTGTGCTGGGATTCAAACCATCTCTGATTGGACCAAGAAGCTTGGTCAGTCCACACCACTCAACTCTGCTTGCAAACCGGATCTCACTGATCTCTCTCGCTGTGATGTGTGTCTGGGAGCAGGGTTACAGGTGAAGCAGGAGCTTATTTCCATAGATGGTAATGCTTCACATTCCATAGATTGTTTTTACTTTGCCATTCTCTATGCTGCTGGGATTGTGAATGAGTTTGGACCTGAAAGCAATGGTGCTGTGACTTGTATTTTTAGCATGTCGGTTTATTCACAACGGGGTTCTGGGGCAAAGAGTCACCAGGCTCTTGTGTTTGGGTTGACAGGAGCTGGGGTGGCTTTGCTGGTGATGTCTTCTCTGTTGGGGGTTTATATATGGTGCGACAGGAAGCACAGGAGGAAAAAGCTTGAGACTTTTCAGTTTGATTTTGACCCTGAAGAACAAGGGTCTAGGCGTAGATTGAGGCCCAATACGGGGTCTATTTGGTTCAAAATTGGGGAGCTTGAGAAGGCAACTGATAGTTTTTCATCTAAGAACTTCATTGGCCGAGGTGGGTTTGGGTTGGTTTTCAAGGGAACCTTGGCTGATGGAAGTGTTGTAGCGGTTAAAAGGATCTTGGAATCTGATTATCAAGGAGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCATAGGAATCTGGTGCCTTTAAGAGGCTGTTGTGTGGCTGAGGAGAGTGAGGATTATGATGAAAGGGGAAGCCAAAGGTATCTTGTGTATGATTACATGCCAAATGGGAACCTGGAGAACCATCTCTTTGTATCATCAGACTCTCAGAAAGCAAAGGGGTCATTGACATGGCCTCAGAGGAAAAGCATAATCTTGGATGTGGCAAAGGGCTTGGCCTATTTGCACTATGGAGTCAAACCTGCAATTTTCCACAGGGATATCAAGGCCACCAATATATTACTTGATGAGGATATGAGGGCAAGAGTTGCTGATTTTGGTCTTGCCAAACAAAGTAGGGAGGGTCAATCTCATCTCACTACCAGAGTGGCTGGAACTCATGGATATCTAGCCCCGGAATATGCACTCTATGGTCAGCTCACTGAGAAGAGTGATGTGTATAGTTTTGGTGTAGTTGTTCTGGAGATTATGTGTGGGAGGAAGGCTCTTGACTTGTCTTCATCAGGATCACCTAGGGCATTCTTGATCACAGATTGGGCTTGGTCACTAGTGAAGGCTGGGAAGTTAGAAGAGGCTCTAGACGGTTCCCTGGTGAAGGATGAGAATTTTCCTAGCTCAAATCCTAAGAGCATAATGGAGAGGTTTTTGCTGGTGGGGATTCTATGCTCCCATGTGATGGTTGCTCTGAGGCCAACAATTGCTGATGCTTTGAAGATGTTGGAAGGTGATGTTGAGGTTCCACAAATCCCAGATCGCCCTATGCCTCTAGGGCACCCTTCCTTTTACAATGATGGCAGTACTTTTAGCATATCTCCAGCACTAAGTGGCCCCAAGTTGCAAACTGGAGACATGCTCAGGTAA 1956 0.4591 MKFVVMMMLLPLMFAVFCSMSLSSAAPSPSTTPTCPIDLNYVLRIPWNTSACHNFQQPLAAKNGTDANTCCISLLSLFGVGLAQHLKETSQFQLPNLATSVSCIQDFQSKLSTLSLPNNLADSCFDPLQFVISPNICAGIQTISDWTKKLGQSTPLNSACKPDLTDLSRCDVCLGAGLQVKQELISIDGNASHSIDCFYFAILYAAGIVNEFGPESNGAVTCIFSMSVYSQRGSGAKSHQALVFGLTGAGVALLVMSSLLGVYIWCDRKHRRKKLETFQFDFDPEEQGSRRRLRPNTGSIWFKIGELEKATDSFSSKNFIGRGGFGLVFKGTLADGSVVAVKRILESDYQGDVEFCNEVEIISNLKHRNLVPLRGCCVAEESEDYDERGSQRYLVYDYMPNGNLENHLFVSSDSQKAKGSLTWPQRKSIILDVAKGLAYLHYGVKPAIFHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKAGKLEEALDGSLVKDENFPSSNPKSIMERFLLVGILCSHVMVALRPTIADALKMLEGDVEVPQIPDRPMPLGHPSFYNDGSTFSISPALSGPKLQTGDMLR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2229 651 Pfam SPARK 31 198 IPR043891 -
Pvu6g2229 651 Gene3D Phosphorylase Kinase; domain 1 284 398 - -
Pvu6g2229 651 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 16 649 - -
Pvu6g2229 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 649 - -
Pvu6g2229 651 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Pvu6g2229 651 CDD STKc_IRAK 320 607 - -
Pvu6g2229 651 SUPERFAMILY Protein kinase-like (PK-like) 295 606 IPR011009 -
Pvu6g2229 651 ProSiteProfiles Protein kinase domain profile. 314 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2229 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pvu6g2229 651 Gene3D Transferase(Phosphotransferase) domain 1 399 613 - -
Pvu6g2229 651 SMART serkin_6 314 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g2229 651 Pfam Protein kinase domain 316 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2229 Pvu-Chr6 31565113 31567972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2229 26 651 Receptor kinase-like Gene Family AT1G11050 64.912 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pvu6g2229 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2229 - - gmx:100806560 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2229 6 31565113 31567972 Pvu2g2569 2 41630887 41633569 PCT